Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g0974 | ATGGAGGAGATTGAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGTTAAAAATAAGATCAGAGAATTTGAATTGGATGGGAAATTCTGGTATGTTATTCTCCGATCCGATTCCAAGTGGCATGTTCGATTTCCCACTGGACTCCTCCACTGAGTATTCTTCCTTTAAGCCCTCCACCTTCTCCGATTTGTTGGCCATCCAAGATTACAATAACCCTTCTTTATTCGACCTCTTCTCTCCACCGCCGCCCTCCTCCGCCGTGCCGGAATCCTCTGAGGTTTTGAATACTCCTCCCACTCCCAATTCCTCCTCCGTCTCCTGCTCCTCCAACGAAAGACCCTTGGACGCCGATGAGGTCCATCGGGACAACTCGCCTTTCAACAAACAGTTGAAAGTGAAAAAGAAGAATCAAAAAAGGGCAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTGGACGACGGTTACAGATGGAGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCCAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAGAAGCGAGTGGAACGATCCTCCGACGACCCTTCCACCGTCGTCACCACCTACGAAGGCCAACACACCCACCAAAGCCCAATCATGCCACGTGGAGCCCTCTCCTCATCCGCCTTCACCGCCACGCCGCCGCTTGTTTTCCCACAGCCGCAATACCACCACCAGTACACGTACACTCCGGCGCCGCCCATGGGATTTGATCCGGTGTTCCATAGCTTGGGAGAAGATCAACGGCGTCGTATCGGCGGATCCTCTTCGAATTCCGATTCTTTCAAAGACCATGGCCTTCTACAAGATATGATCGTACCCCCCTCCTCCTCCTCCTTACACATCCCCAAAGAAGAGTAA | 915 | 50.82 | MEEIEKKKKKKKKEELKIRSENLNWMGNSGMLFSDPIPSGMFDFPLDSSTEYSSFKPSTFSDLLAIQDYNNPSLFDLFSPPPPSSAVPESSEVLNTPPTPNSSSVSCSSNERPLDADEVHRDNSPFNKQLKVKKKNQKRAREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSTVVTTYEGQHTHQSPIMPRGALSSSAFTATPPLVFPQPQYHHQYTYTPAPPMGFDPVFHSLGEDQRRRIGGSSSNSDSFKDHGLLQDMIVPPSSSSLHIPKEE | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10736993 | 10738144 | + | Lag0031612.1 | Lac11g0974 | 586832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g0974 | 304 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 94 | 222 | IPR044810 | GO:0003700(InterPro) | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 199 | 217 | - | - | |
Lac11g0974 | 304 | Pfam | WRKY DNA -binding domain | 157 | 214 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g0974 | 304 | ProSiteProfiles | WRKY domain profile. | 151 | 216 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 268 | 282 | - | - | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 80 | 139 | - | - | |
Lac11g0974 | 304 | SMART | WRKY_cls | 156 | 215 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g0974 | 304 | Gene3D | WRKY domain | 140 | 217 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g0974 | 304 | SUPERFAMILY | WRKY DNA-binding domain | 148 | 216 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 113 | 129 | - | - | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 88 | 111 | - | - | |
Lac11g0974 | 304 | Coils | Coil | 1 | 24 | - | - | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 198 | 217 | - | - | |
Lac11g0974 | 304 | FunFam | WRKY transcription factor 57 | 142 | 216 | - | - | |
Lac11g0974 | 304 | MobiDBLite | consensus disorder prediction | 257 | 304 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0974 | Lac-Chr11:10736993 | Lac7g0975 | Lac-Chr7:8283134 | 1.70E-56 | dispersed | |
Lac11g0974 | Lac-Chr11:10736993 | Lac11g0424 | Lac-Chr11:4337707 | 2.40E-42 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22923 | PF03106 | WRKY | 8.30E-27 | CL0274 | Lac | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g0974 | - | - | - | 0.0 |