Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g0974 ATGGAGGAGATTGAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGTTAAAAATAAGATCAGAGAATTTGAATTGGATGGGAAATTCTGGTATGTTATTCTCCGATCCGATTCCAAGTGGCATGTTCGATTTCCCACTGGACTCCTCCACTGAGTATTCTTCCTTTAAGCCCTCCACCTTCTCCGATTTGTTGGCCATCCAAGATTACAATAACCCTTCTTTATTCGACCTCTTCTCTCCACCGCCGCCCTCCTCCGCCGTGCCGGAATCCTCTGAGGTTTTGAATACTCCTCCCACTCCCAATTCCTCCTCCGTCTCCTGCTCCTCCAACGAAAGACCCTTGGACGCCGATGAGGTCCATCGGGACAACTCGCCTTTCAACAAACAGTTGAAAGTGAAAAAGAAGAATCAAAAAAGGGCAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTGGACGACGGTTACAGATGGAGAAAATACGGTCAAAAAGCCGTTAAAAACAGCCCTTATCCCAGAAGTTATTACCGTTGCACCACCGCCGGCTGCGGCGTCAAGAAGCGAGTGGAACGATCCTCCGACGACCCTTCCACCGTCGTCACCACCTACGAAGGCCAACACACCCACCAAAGCCCAATCATGCCACGTGGAGCCCTCTCCTCATCCGCCTTCACCGCCACGCCGCCGCTTGTTTTCCCACAGCCGCAATACCACCACCAGTACACGTACACTCCGGCGCCGCCCATGGGATTTGATCCGGTGTTCCATAGCTTGGGAGAAGATCAACGGCGTCGTATCGGCGGATCCTCTTCGAATTCCGATTCTTTCAAAGACCATGGCCTTCTACAAGATATGATCGTACCCCCCTCCTCCTCCTCCTTACACATCCCCAAAGAAGAGTAA 915 50.82 MEEIEKKKKKKKKEELKIRSENLNWMGNSGMLFSDPIPSGMFDFPLDSSTEYSSFKPSTFSDLLAIQDYNNPSLFDLFSPPPPSSAVPESSEVLNTPPTPNSSSVSCSSNERPLDADEVHRDNSPFNKQLKVKKKNQKRAREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSTVVTTYEGQHTHQSPIMPRGALSSSAFTATPPLVFPQPQYHHQYTYTPAPPMGFDPVFHSLGEDQRRRIGGSSSNSDSFKDHGLLQDMIVPPSSSSLHIPKEE 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10736993 10738144 + Lag0031612.1 Lac11g0974 586832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g0974 304 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 222 IPR044810 GO:0003700(InterPro)
Lac11g0974 304 MobiDBLite consensus disorder prediction 199 217 - -
Lac11g0974 304 Pfam WRKY DNA -binding domain 157 214 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0974 304 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0974 304 MobiDBLite consensus disorder prediction 268 282 - -
Lac11g0974 304 MobiDBLite consensus disorder prediction 80 139 - -
Lac11g0974 304 SMART WRKY_cls 156 215 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0974 304 Gene3D WRKY domain 140 217 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0974 304 SUPERFAMILY WRKY DNA-binding domain 148 216 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Lac11g0974 304 MobiDBLite consensus disorder prediction 113 129 - -
Lac11g0974 304 MobiDBLite consensus disorder prediction 88 111 - -
Lac11g0974 304 Coils Coil 1 24 - -
Lac11g0974 304 MobiDBLite consensus disorder prediction 198 217 - -
Lac11g0974 304 FunFam WRKY transcription factor 57 142 216 - -
Lac11g0974 304 MobiDBLite consensus disorder prediction 257 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0974 Lac-Chr11:10736993 Lac7g0975 Lac-Chr7:8283134 1.70E-56 dispersed
Lac11g0974 Lac-Chr11:10736993 Lac11g0424 Lac-Chr11:4337707 2.40E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22923 PF03106 WRKY 8.30E-27 CL0274 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g0974 - - - 0.0