Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g1043 | ATGGCGCCCGATCTAAACACAACACTTTCCAAGAAGACGTTTGTTTTTGGTATGAAGGTATGGGTGTTTACTGGAATCCTGGTGGGGGTGTTTATTGTAGTAGTCCTTGTGGTGCTATCAATATGTGTTACTTCACGAAGAAAGTCTAGAAGGGTTAATGGCATGCTTCCTCTCAGCCGTATTCCCACTGCATCAAAGGAAATCAAGGAGATTGGAGTGGATCATGTTTCAGCAATCCAGAACGGCCCCCACCCCCACGATGGATTCGGATTCGACACGGAATCGGAAAAAGTTCTTCTATATTCAAACAAGGCATATAATTACAGCATATCAAGTTCAGTTGATCACACGGAGATCTATGCTATTGATACTGGAGAAGCAAGCAAGGAAGCAAGTGCTTTGCATAGACCCTCAGATTCAATACCACCAGACCCTTCGCCACTGGCTGGTCTGCCTGAATTCTCACAACTGGGATGGGGTCACTGGTTCACCTTAAGAGACCTGGAACTTGCAACAATGCATTTTTCAAACGATAATATAATTGGGGAGGGAGGATATGGAGTTGTTTATCGAGGTCATCTAATCAATGGGACACCTGTGGCTGTCAAAAAGCTTCTAAATCTAGGACAAGCGGAAAGGGAATTCAGAGTGGAAGTGGAAGCCTTTGGGCATGTGCGGCATAAGAACTTAGTTCGGTTGCTGGGGTACTGCATTGAAGGAACGCACAGGATACTAGTATATGAATATGTGGACAATGGAAATCTAGAGCAGTGGCTTCATGGAGCTCTATGTCAGTATGGATATCTCACTTGGGAAGCACGAATCAAAATCCTCCTTGGTACTGCTAAGGCGCTGGCATATTTGCACGAGGCAATCGAACCAAAAATTGTGCATCGAGATATTAAGGCAAGCAACATATTGATTGATGATGAGTTTAATGCAAAGCTATCAGACTTTGGGCTAGCCAAACTACTCGGTGCTGGGAAGAGTCATATAACCACCAGAGTTATGGGAACGTTTGGATATGTGGCGCCAGAATATGCCAAATCTGGACTTCTAAATGAAAAGAGCGACGTTTATAGCTTTGGAGTGGTCCTTTTGGAAGCAATTACTGGGAGAGACCCCGTTGATTATGGTCGTCCAACTCACGAGGTAAATTTGGTAGATTGGCTAAAGATGATGGTAGGAAGCAAACGGTCAGAAGAGGTGGTAGACCCAAATATAGAGAGAAAGCCATCAGTTAGTGAACTGAAGCGAGTTCTTCTGACTGCTTTGAGATGTGTGGATCCAGATGCTGATAAGAGGCCTAAGATGAGCCAAGTTGCCCGCATGCTCGAGTCCGAGGAATATCCAATTCCTCGACAGGATCGGAAACCCAGAAAGGGCCATGCTAATGCAACCAAAATGGAGGCTGAGAAACAGGAGAGAGGACCCAGAAGACACAGATAA | 1449 | 45.07 | MAPDLNTTLSKKTFVFGMKVWVFTGILVGVFIVVVLVVLSICVTSRRKSRRVNGMLPLSRIPTASKEIKEIGVDHVSAIQNGPHPHDGFGFDTESEKVLLYSNKAYNYSISSSVDHTEIYAIDTGEASKEASALHRPSDSIPPDPSPLAGLPEFSQLGWGHWFTLRDLELATMHFSNDNIIGEGGYGVVYRGHLINGTPVAVKKLLNLGQAEREFRVEVEAFGHVRHKNLVRLLGYCIEGTHRILVYEYVDNGNLEQWLHGALCQYGYLTWEARIKILLGTAKALAYLHEAIEPKIVHRDIKASNILIDDEFNAKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAKSGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSKRSEEVVDPNIERKPSVSELKRVLLTALRCVDPDADKRPKMSQVARMLESEEYPIPRQDRKPRKGHANATKMEAEKQERGPRRHR | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11828326 | 11830596 | - | Lag0031681.1 | Lac11g1043 | 586901 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g1043 | 482 | Pfam | Protein kinase domain | 177 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g1043 | 482 | ProSitePatterns | Protein kinases ATP-binding region signature. | 181 | 204 | IPR017441 | GO:0005524(InterPro) | |
Lac11g1043 | 482 | FunFam | Putative receptor-like serine/threonine-protein kinase | 250 | 461 | - | - | |
Lac11g1043 | 482 | SUPERFAMILY | Protein kinase-like (PK-like) | 159 | 453 | IPR011009 | - | |
Lac11g1043 | 482 | PANTHER | OS01G0323000 PROTEIN | 1 | 472 | IPR052232 | - | |
Lac11g1043 | 482 | MobiDBLite | consensus disorder prediction | 432 | 482 | - | - | |
Lac11g1043 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 250 | 458 | - | - | |
Lac11g1043 | 482 | FunFam | serine/threonine-protein kinase PBS1-like | 152 | 249 | - | - | |
Lac11g1043 | 482 | SMART | serkin_6 | 175 | 445 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g1043 | 482 | CDD | STKc_IRAK | 181 | 446 | - | - | |
Lac11g1043 | 482 | Gene3D | Phosphorylase Kinase; domain 1 | 156 | 249 | - | - | |
Lac11g1043 | 482 | ProSiteProfiles | Protein kinase domain profile. | 175 | 451 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g1043 | 482 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 296 | 308 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g1043 | 482 | MobiDBLite | consensus disorder prediction | 449 | 482 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g1043 | Lac-Chr11:11828326 | Lac9g2257 | Lac-Chr9:41932067 | 1.10E-158 | dispersed | |
Lac11g1043 | Lac-Chr11:11828326 | Lac3g1859 | Lac-Chr3:20715495 | 1.50E-62 | wgd | |
Lac11g1043 | Lac-Chr11:11828326 | Lac5g1297 | Lac-Chr5:25221919 | 6.10E-11 | wgd | |
Lac11g1043 | Lac-Chr11:11828326 | Lac7g1601 | Lac-Chr7:18798082 | 2.00E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85751 | PF00069 | Pkinase | 1.40E-47 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g1043 | - | - | - | 0.0 |