Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g1120 ATGAGGGAGGCAAAAGAAGAGATCAAGTATTCGGATTATGTGATTCCGAAGGGATCTTTTGTTGTTCCATTTCTTTCTGCTGTACATTTGGACGAGAATATATACGAAGAAGCTTTAAGTTTCAACCCTTGGAGATGGATGGAGCTTAAAAATCAGGAAATGAGAAATTGGAGGAGTAGTCCATTCTTTGCTCCATTCGGAGGGGGTGCTAGATTGTGTCCTGGAGCAGAATTGGCGCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTATCGGTGGAGCCAACTCAAAGCAGATAGGATGTGTTTCTTTCCCTCTGCTCGGCTAGTCAACGGATTCCAAATTCGCTTGAAAAGATGGGAACACTGA 378 43.12 MREAKEEIKYSDYVIPKGSFVVPFLSAVHLDENIYEEALSFNPWRWMELKNQEMRNWRSSPFFAPFGGGARLCPGAELARLQIALFLHHFVTKYRWSQLKADRMCFFPSARLVNGFQIRLKRWEH 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13871492 13872442 + Lag0031758.1 Lac11g1120 586978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g1120 125 PANTHER CYTOCHROME P450 26 1 99 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Lac11g1120 125 Gene3D Cytochrome P450 1 106 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 PRINTS E-class P450 group IV signature 13 27 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 PRINTS E-class P450 group IV signature 57 73 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 PRINTS E-class P450 group IV signature 73 91 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 PRINTS E-class P450 group IV signature 29 47 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 SUPERFAMILY Cytochrome P450 1 122 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g1120 125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 66 75 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g1120 125 Pfam Cytochrome P450 1 103 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1120 Lac-Chr11:13871492 Lac12g2428 Lac-Chr12:41363118 5.00E-26 dispersed
Lac11g1120 Lac-Chr11:13871492 Lac4g2977 Lac-Chr4:48035012 1.30E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g1120 - - - 0.0