Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g1707 ATGGCGCCTTCCTCCCCACTTCAATCTACAGTCGAAAACATCGAAACCAATTTCCAGCCGTTCTATGTTCTTCATAAAGCATCATCTCGGAAAAACTCGAGAAAATCAAATCAATGTGGAAAGCCAAGGAAGAGAACTAAACTCTCTCCATCTGGTCCCAATGGAATCGAGACTCCTGAGACTGAAGAACGAGACGGGTCTCTGCTTGAACACCTGCGAATGGAGGCTCTGGAGCTTGTATGGTCGAAAATGGAAACCACCATTAAGGATGTTTTGAGGGATACTAATGTCAAAGTTTTTGATGATATATGTCGCTGGGTTTATGAGTCCTTTGCTGCTATTCAATCTTCTGGGACACCTAGTTCGTCTTCAGCTACTCGGCCTTTCCCTACCTTAACTCGTGCTGATTGTAAAATATTGTTCACTGGCTTGGTTCTCACTAAAAATATGGAAGTTGTGGATGATTTACTGACATTTGAAGAGCTTGGCTTTCATTTAAAATCTCATGGATGCCATGTGGCAAGTATCTCTTCTCAAGAATTATCTGCCAAGAGTAGCGTAGGCGGCTGCATCAGAAGTTTATTGAGACAGTTGTTGAAGGTTACTGTTGATGCAGCTGAGATGTTCATCCTAGCATCATGGTACAGAGAACAAGGATACTATGAAAACCCAGTAGTTGTGATTATAGAAGACATTGAACGATGTTGTGGTTCAGTTTTATCTGATTTCATTATTATGTTGAGCGAATGGGTTGTCAAGATTCCAATTATTTTAATTATGGGAGTTGCTACAACAATTGATGCTCCTGTAAGCGTGCTTCGTTCAAATGCACTACAGCAGTTGTGCCCTAGCAAGTTCGTATTAGGATCACCGGCTGAGAGGATGGAAGCAGTTGTTGAGGCTGTTCTTCTAAGGCATTGTTGTATGTTCAGCATTGGTCACAAGGTTGCCGTCTTTCTGAGGAAGTACTTCTTAAATCAGGATGGCACTTTAACATCCTTTATAAGAGCCATGAAGATTGCGTGTGTCCAACACTTCTCCATGGAACCCTTGAGCTTTATGCTTGCGAGATTGCTTCTTGAAGAAGAGAATAAGGGTTTTCAGGATGGGAATCATGCATTTTTCCTAGAACTTCTATCCAAGCAGGCTTCAGATCTTCTGTCATATTCAAGGTACCCATTAGCCGAAGGTACTGGTAATGATCTTGGTAATATATTGTCAGAATTAAAGAGATGGCGGAAGGGCTGGAGTGCCGTTGTCCTGTGTCTTTATCAAGTTGGAAAGTTTGGAAAAGTTCAATTGCTTGACTTACTTTGTGAGGCACTCGATCCACAACTTCTCAAACCAATAACTTCTGAAAATTCAAGTAGACTGCAGCAAGGAAAGGGGATATTGTTTTCAAGTAGTTGTGAGCTACAATATCAATTTTCATTACGCAATGATGGGTATATTTATCAAGCAATTCGAAAAATGAGGTAA 1479 41.04 MAPSSPLQSTVENIETNFQPFYVLHKASSRKNSRKSNQCGKPRKRTKLSPSGPNGIETPETEERDGSLLEHLRMEALELVWSKMETTIKDVLRDTNVKVFDDICRWVYESFAAIQSSGTPSSSSATRPFPTLTRADCKILFTGLVLTKNMEVVDDLLTFEELGFHLKSHGCHVASISSQELSAKSSVGGCIRSLLRQLLKVTVDAAEMFILASWYREQGYYENPVVVIIEDIERCCGSVLSDFIIMLSEWVVKIPIILIMGVATTIDAPVSVLRSNALQQLCPSKFVLGSPAERMEAVVEAVLLRHCCMFSIGHKVAVFLRKYFLNQDGTLTSFIRAMKIACVQHFSMEPLSFMLARLLLEEENKGFQDGNHAFFLELLSKQASDLLSYSRYPLAEGTGNDLGNILSELKRWRKGWSAVVLCLYQVGKFGKVQLLDLLCEALDPQLLKPITSENSSRLQQGKGILFSSSCELQYQFSLRNDGYIYQAIRKMR 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30965605 30969395 + Lag0032345.1 Lac11g1707 587565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g1707 492 CDD Orc3 72 353 - -
Lac11g1707 492 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 65 354 IPR045667 -
Lac11g1707 492 MobiDBLite consensus disorder prediction 28 42 - -
Lac11g1707 492 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 15 453 IPR020795 GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005656(PANTHER)|GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)|GO:0031261(PANTHER)
Lac11g1707 492 MobiDBLite consensus disorder prediction 26 67 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g1707 K02605 - csv:101215291 837.41