Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g1754 ATGCTCAAACTAATTCTTCTGGTTTCTTCGGCCACCATTTTTGTTCTTCTCCTAATTTCCATCTTCCTTTTCCGCCATAAGCTCTTCAAAACAGACCACGCACACGACATCGAGAAGCCGTCGCCGGAAAATAACAAGCTGAAAAGAAAAGACACGGCCACGCCCACGGCGGTGGAGGAGGAGCTGATAACGTTTGAGGGCGGCGAGGAGTTGACGATCGACGAGATTCTGGAAGCGCCGGGGGAAGTGATCGGAAAATCCCACTATGGAACTCTCTACAAGGCTTCGTTACAGAGCACCCAGAGGACTAGACTACTCAGATTCCTCCGCCCGGCCACCGTCGAACATTCCGCCGGAGACCAGGTGGTTCGCTTTCTGGGATCGATTCGGCACCGGAATTTGGTACCGATGCTCGGATTTTACGCCGGCGGGAGGGGCGAGAGGCTTCTCGTTCATCCGTTTTACGGCAGAGGCAATTTGGCGGAGTTCATTAGAGTAGGAGAATCAGAATCAAAAAATTGGGAGATCATTTACAGAATCTCCCTCGGAATCGCAAAAGCCCTAGATCACCTTCACAACGGATTGCAAAAACCAGTACCGCACGCAAATCTCAAGTCCAAGAACATTCTTCTCGATCCAAATCTCCACCCGCACGTCTCCGATTTCGGCCTGCATCTCCTCCTCAACGCCGCCGCGACTCAACAAATGCTCCAACTTTCCGCCGCCTCCGGCTACAAGCCGCCGGAGCTGCTCAACATGACCGACGCCGACGAACGGACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCCGCCAAAGAGCCGGCGAATCGAAATGCGATTGCTAGCGGCGGAGACGGCGGCGATTGCGCTGTTTCTGAGGAGCGGATTCTCCGATGCCTCGTTCAGATCGCCGAGGCTTGTTGTTCTTCTTCGCCGGATCTTCGGCCGGGTTTCAAGGAAGTGATTTCGAAGATTGAAGAAATCGGAAGGATTGAGAAGGATTGA 1017 53.29 MLKLILLVSSATIFVLLLISIFLFRHKLFKTDHAHDIEKPSPENNKLKRKDTATPTAVEEELITFEGGEELTIDEILEAPGEVIGKSHYGTLYKASLQSTQRTRLLRFLRPATVEHSAGDQVVRFLGSIRHRNLVPMLGFYAGGRGERLLVHPFYGRGNLAEFIRVGESESKNWEIIYRISLGIAKALDHLHNGLQKPVPHANLKSKNILLDPNLHPHVSDFGLHLLLNAAATQQMLQLSAASGYKPPELLNMTDADERTDVYSYGKILLELLSAKEPANRNAIASGGDGGDCAVSEERILRCLVQIAEACCSSSPDLRPGFKEVISKIEEIGRIEKD 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31813021 31817916 + Lag0032392.1 Lac11g1754 587612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g1754 338 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 333 IPR052451 -
Lac11g1754 338 SUPERFAMILY Protein kinase-like (PK-like) 81 330 IPR011009 -
Lac11g1754 338 Gene3D Transferase(Phosphotransferase) domain 1 71 338 - -
Lac11g1754 338 Pfam Protein tyrosine and serine/threonine kinase 82 328 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac11g1754 338 ProSiteProfiles Protein kinase domain profile. 78 332 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1754 Lac-Chr11:31813021 Lac5g2771 Lac-Chr5:46111174 6.20E-87 dispersed
Lac11g1754 Lac-Chr11:31813021 Lac3g0639 Lac-Chr3:4952665 4.10E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85758 PF07714 PK_Tyr_Ser-Thr 5.60E-26 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g1754 - - - 0.0