Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g1754 | ATGCTCAAACTAATTCTTCTGGTTTCTTCGGCCACCATTTTTGTTCTTCTCCTAATTTCCATCTTCCTTTTCCGCCATAAGCTCTTCAAAACAGACCACGCACACGACATCGAGAAGCCGTCGCCGGAAAATAACAAGCTGAAAAGAAAAGACACGGCCACGCCCACGGCGGTGGAGGAGGAGCTGATAACGTTTGAGGGCGGCGAGGAGTTGACGATCGACGAGATTCTGGAAGCGCCGGGGGAAGTGATCGGAAAATCCCACTATGGAACTCTCTACAAGGCTTCGTTACAGAGCACCCAGAGGACTAGACTACTCAGATTCCTCCGCCCGGCCACCGTCGAACATTCCGCCGGAGACCAGGTGGTTCGCTTTCTGGGATCGATTCGGCACCGGAATTTGGTACCGATGCTCGGATTTTACGCCGGCGGGAGGGGCGAGAGGCTTCTCGTTCATCCGTTTTACGGCAGAGGCAATTTGGCGGAGTTCATTAGAGTAGGAGAATCAGAATCAAAAAATTGGGAGATCATTTACAGAATCTCCCTCGGAATCGCAAAAGCCCTAGATCACCTTCACAACGGATTGCAAAAACCAGTACCGCACGCAAATCTCAAGTCCAAGAACATTCTTCTCGATCCAAATCTCCACCCGCACGTCTCCGATTTCGGCCTGCATCTCCTCCTCAACGCCGCCGCGACTCAACAAATGCTCCAACTTTCCGCCGCCTCCGGCTACAAGCCGCCGGAGCTGCTCAACATGACCGACGCCGACGAACGGACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCCGCCAAAGAGCCGGCGAATCGAAATGCGATTGCTAGCGGCGGAGACGGCGGCGATTGCGCTGTTTCTGAGGAGCGGATTCTCCGATGCCTCGTTCAGATCGCCGAGGCTTGTTGTTCTTCTTCGCCGGATCTTCGGCCGGGTTTCAAGGAAGTGATTTCGAAGATTGAAGAAATCGGAAGGATTGAGAAGGATTGA | 1017 | 53.29 | MLKLILLVSSATIFVLLLISIFLFRHKLFKTDHAHDIEKPSPENNKLKRKDTATPTAVEEELITFEGGEELTIDEILEAPGEVIGKSHYGTLYKASLQSTQRTRLLRFLRPATVEHSAGDQVVRFLGSIRHRNLVPMLGFYAGGRGERLLVHPFYGRGNLAEFIRVGESESKNWEIIYRISLGIAKALDHLHNGLQKPVPHANLKSKNILLDPNLHPHVSDFGLHLLLNAAATQQMLQLSAASGYKPPELLNMTDADERTDVYSYGKILLELLSAKEPANRNAIASGGDGGDCAVSEERILRCLVQIAEACCSSSPDLRPGFKEVISKIEEIGRIEKD | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31813021 | 31817916 | + | Lag0032392.1 | Lac11g1754 | 587612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g1754 | 338 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 4 | 333 | IPR052451 | - | |
Lac11g1754 | 338 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 330 | IPR011009 | - | |
Lac11g1754 | 338 | Gene3D | Transferase(Phosphotransferase) domain 1 | 71 | 338 | - | - | |
Lac11g1754 | 338 | Pfam | Protein tyrosine and serine/threonine kinase | 82 | 328 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g1754 | 338 | ProSiteProfiles | Protein kinase domain profile. | 78 | 332 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g1754 | Lac-Chr11:31813021 | Lac5g2771 | Lac-Chr5:46111174 | 6.20E-87 | dispersed | |
Lac11g1754 | Lac-Chr11:31813021 | Lac3g0639 | Lac-Chr3:4952665 | 4.10E-30 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85758 | PF07714 | PK_Tyr_Ser-Thr | 5.60E-26 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g1754 | - | - | - | 0.0 |