Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g1795 | ATGCCGGAATCGGAAAGTGGAACGCCGGTACCGTCGGCGCCGGCGACGCCCGGGACGCCGGGAGGGCCGCTGTTTTCCGGTCTACGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCGCGGTGCAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCATCCTCACACGTGCTTCACTGACTTCCCTGCACCTGATGTCTCTCTCACCCGCAAGCTGGGAGCAGAATTTGTGGGAACATTCATCCTTATATTTGCTGCAACGGCAGGGCCCATTGTGAACCAAAAGTACAACGGCGTCGAGACTCTCATCGGAAACGCCGCATGCGCCGGCCTGGCCGTGATGATTGTAATTCTGTCGACCGGACACATCTCCGGCGCCCACCTGAACCCATCGCTCACCATTGCCTTCGCCGCCCTCCGCCATTTCCCTTGGGTCCAAGTTCCGGCCTACATCGCCGCCCAAGTCTCCGCCTCCATCTGCGCCTCCTTCGCTCTCAAAGGTGTTTTTCACCCTTTCATGTCCGGCGGCGTCACCGTCCCCTCCGTCAGCACCGGCCAGGCCTTCGCTCTCGAATTCCTCATCACTTTCAATCTCTTGTTTGTCGTCACTGCGGTCGCCACTGACACTCGCGCGGTCGGAGAGTTGGCCGGAATTGCAGTCGGAGCTACAGTGCTACTCAACATTCTTGTCGCAGGGCCCTCAACCGGTGCTTCAATGAACCCAGTTCGAACTTTGGGCCCCGCCGTGGCTGCCGGAAACTACAGAGAATTGTGGCTGTATCTGGTGGCGCCGACGCTGGGGCGATCGTGGGCGCCGGAACTTACACAATGGTGA | 840 | 59.88 | MPESESGTPVPSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGHPHTCFTDFPAPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFLITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILVAGPSTGASMNPVRTLGPAVAAGNYRELWLYLVAPTLGRSWAPELTQW | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32486240 | 32490374 | + | Lag0032433.1 | Lac11g1795 | 587653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g1795 | 279 | SUPERFAMILY | Aquaporin-like | 69 | 274 | IPR023271 | - | |
Lac11g1795 | 279 | ProSitePatterns | MIP family signature. | 129 | 137 | IPR022357 | - | |
Lac11g1795 | 279 | PANTHER | AQUAPORIN NIP2-1 | 68 | 269 | IPR034294 | - | |
Lac11g1795 | 279 | Gene3D | Glycerol uptake facilitator protein. | 64 | 274 | IPR023271 | - | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 72 | 91 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 111 | 135 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 148 | 167 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 192 | 210 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | PRINTS | Major intrinsic protein family signature | 260 | 279 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | FunFam | Aquaporin NIP2-1 | 60 | 273 | - | - | |
Lac11g1795 | 279 | Pfam | Major intrinsic protein | 68 | 270 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lac11g1795 | 279 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g1795 | Lac-Chr11:32486240 | Lac1g3444 | Lac-Chr1:53840840 | 5.30E-52 | dispersed | |
Lac11g1795 | Lac-Chr11:32486240 | Lac11g1797 | Lac-Chr11:32512416 | 6.00E-112 | proximal | |
Lac11g0608 | Lac-Chr11:6231782 | Lac11g1795 | Lac-Chr11:32486240 | 1.50E-84 | transposed | |
Lac11g1795 | Lac-Chr11:32486240 | Lac8g0645 | Lac-Chr8:11004847 | 1.10E-46 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g1795 | K09874 | - | csv:101212651 | 507.294 |