Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g1990 ATGCCATTGCTCCGACCCACCGCCGCCATGACCTTGCCGGAGGTCTTCTCCCCCCGGTTGCCCGATAGGGGTCCGGTTATTCCGGTCAGCAGTCTCGTCAAGTTCCTCGAGCGTCTTCAGGTTGTGGCGCTCGACTCCTTCGGTAAAGGGGATTTCGATCTTAAATACTATGTCGATTTGTCGCTGAAATTCGATTTGAATTCTACCGAGAGAGCGTTCGATGCCCTTGGGCGATCCTCCAATGGCTCTGTGCCGGCGGAGGATTTGAAGGCGTTTATTAGAGAGTATTTCAATAGTGCTGGCTCCGATTTGGTGTATTCCGACCCGGTGGATTTTCTCCCTCAGCCTGTGGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGATATTCATAAATTCTGGAAGAATCTTAGCCGGAGAGCCTCCGATGATCTCCTTCATCGGCCGGATACCCACACTCTGTTACCGTTGCCGGAGCCCTGCGTCATTCCGGGTTCCAGATTCCGGGAAGTTTACTATTGGGATTCATATTGGATTATCAGAGGTTTGTTAGCAAGTAAAATGTATGAAACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCTAGAGTTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATATACCTTAGGACACGGGATTTAGAGTTTGTGAGTAATGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCAATTACTGTCAATGCTCCTGGTGGAAATCATTCTTTATCTAGGTACTATGCAATGTGGAACGAACCGCGACCTGAATCTTCGCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTGAGTAACTATGAAAAGCAGCAACTATACCGAGAGATCGCATCGGCCGCGGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCAGACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATCTGGCAAGAGCTGTTGGAGATTATGGCACTGCAGAGTACTTTTTGGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTCGTTAATGGCTCTTGCAACGTTGCCCATACATGGGATGCTCGGAACCAGAATCAGAACATATTTGCTTCAAACTTCGTTCCTTTGTGGATCGAATCATTCTACTCCGATAGCAGACAGATGAAGAAAGTCTTGAAAAGCTTACGGAACTCAGGCTTGCTGTGCAATGCCGGGATTGCAACTTCAACAATCAACTCAGGAGAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATCGTCGAGGGACTGGCGAGATCCGAACTGAAAGAAGCAAGAGCATTGGCTAAGGATATCGCCGCGAGATGGCTCCGAACCAACTATGTAGCTTACAAGAAAACAGGATATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGTGCAGGTGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCTTTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATTGACTGCTACTTAACTTCTTAA 1737 46.0 MPLLRPTAAMTLPEVFSPRLPDRGPVIPVSSLVKFLERLQVVALDSFGKGDFDLKYYVDLSLKFDLNSTERAFDALGRSSNGSVPAEDLKAFIREYFNSAGSDLVYSDPVDFLPQPVGFLPKVENAEVRAWALDIHKFWKNLSRRASDDLLHRPDTHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYETAKGIVINLISMIDEFGHVLNGARVYYTNRSQPPLLSSMVYDIYLRTRDLEFVSNALPALIKEHKFWNSGFHSITVNAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVSNYEKQQLYREIASAAESGWDFSSRWMRDQTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYGTAEYFLEASLVRKKTINSIFWNSEKGQWLDYWLVNGSCNVAHTWDARNQNQNIFASNFVPLWIESFYSDSRQMKKVLKSLRNSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIVEGLARSELKEARALAKDIAARWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTS 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 35432132 35435200 - Lag0032628.1 Lac11g1990 587848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g1990 578 Pfam Trehalase 52 565 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 280 297 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 390 406 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 315 332 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 347 364 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 548 561 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 468 484 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PRINTS Glycosyl hydrolase family 37 signature 211 229 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Lac11g1990 578 PANTHER TREHALASE 38 574 IPR001661 GO:0004555(PANTHER)|GO:0004555(InterPro)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Lac11g1990 578 SUPERFAMILY Six-hairpin glycosidases 52 567 IPR008928 GO:0005975(InterPro)
Lac11g1990 578 Gene3D - 47 574 IPR012341 GO:0005975(InterPro)
Lac11g1990 578 ProSitePatterns Trehalase signature 2. 475 484 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g1990 K01194 - csv:101208719 1040.8