Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g1990 | ATGCCATTGCTCCGACCCACCGCCGCCATGACCTTGCCGGAGGTCTTCTCCCCCCGGTTGCCCGATAGGGGTCCGGTTATTCCGGTCAGCAGTCTCGTCAAGTTCCTCGAGCGTCTTCAGGTTGTGGCGCTCGACTCCTTCGGTAAAGGGGATTTCGATCTTAAATACTATGTCGATTTGTCGCTGAAATTCGATTTGAATTCTACCGAGAGAGCGTTCGATGCCCTTGGGCGATCCTCCAATGGCTCTGTGCCGGCGGAGGATTTGAAGGCGTTTATTAGAGAGTATTTCAATAGTGCTGGCTCCGATTTGGTGTATTCCGACCCGGTGGATTTTCTCCCTCAGCCTGTGGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGATATTCATAAATTCTGGAAGAATCTTAGCCGGAGAGCCTCCGATGATCTCCTTCATCGGCCGGATACCCACACTCTGTTACCGTTGCCGGAGCCCTGCGTCATTCCGGGTTCCAGATTCCGGGAAGTTTACTATTGGGATTCATATTGGATTATCAGAGGTTTGTTAGCAAGTAAAATGTATGAAACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCTAGAGTTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATATACCTTAGGACACGGGATTTAGAGTTTGTGAGTAATGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCAATTACTGTCAATGCTCCTGGTGGAAATCATTCTTTATCTAGGTACTATGCAATGTGGAACGAACCGCGACCTGAATCTTCGCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTGAGTAACTATGAAAAGCAGCAACTATACCGAGAGATCGCATCGGCCGCGGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCAGACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATCTGGCAAGAGCTGTTGGAGATTATGGCACTGCAGAGTACTTTTTGGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTCGTTAATGGCTCTTGCAACGTTGCCCATACATGGGATGCTCGGAACCAGAATCAGAACATATTTGCTTCAAACTTCGTTCCTTTGTGGATCGAATCATTCTACTCCGATAGCAGACAGATGAAGAAAGTCTTGAAAAGCTTACGGAACTCAGGCTTGCTGTGCAATGCCGGGATTGCAACTTCAACAATCAACTCAGGAGAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATCGTCGAGGGACTGGCGAGATCCGAACTGAAAGAAGCAAGAGCATTGGCTAAGGATATCGCCGCGAGATGGCTCCGAACCAACTATGTAGCTTACAAGAAAACAGGATATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGTGCAGGTGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCTTTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATTGACTGCTACTTAACTTCTTAA | 1737 | 46.0 | MPLLRPTAAMTLPEVFSPRLPDRGPVIPVSSLVKFLERLQVVALDSFGKGDFDLKYYVDLSLKFDLNSTERAFDALGRSSNGSVPAEDLKAFIREYFNSAGSDLVYSDPVDFLPQPVGFLPKVENAEVRAWALDIHKFWKNLSRRASDDLLHRPDTHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYETAKGIVINLISMIDEFGHVLNGARVYYTNRSQPPLLSSMVYDIYLRTRDLEFVSNALPALIKEHKFWNSGFHSITVNAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVSNYEKQQLYREIASAAESGWDFSSRWMRDQTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDYGTAEYFLEASLVRKKTINSIFWNSEKGQWLDYWLVNGSCNVAHTWDARNQNQNIFASNFVPLWIESFYSDSRQMKKVLKSLRNSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIVEGLARSELKEARALAKDIAARWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTS | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 35432132 | 35435200 | - | Lag0032628.1 | Lac11g1990 | 587848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g1990 | 578 | Pfam | Trehalase | 52 | 565 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 280 | 297 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 390 | 406 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 315 | 332 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 347 | 364 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 548 | 561 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 468 | 484 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PRINTS | Glycosyl hydrolase family 37 signature | 211 | 229 | IPR001661 | GO:0004555(InterPro)|GO:0005991(InterPro) | |
Lac11g1990 | 578 | PANTHER | TREHALASE | 38 | 574 | IPR001661 | GO:0004555(PANTHER)|GO:0004555(InterPro)|GO:0005991(InterPro)|GO:0005993(PANTHER) | |
Lac11g1990 | 578 | SUPERFAMILY | Six-hairpin glycosidases | 52 | 567 | IPR008928 | GO:0005975(InterPro) | |
Lac11g1990 | 578 | Gene3D | - | 47 | 574 | IPR012341 | GO:0005975(InterPro) | |
Lac11g1990 | 578 | ProSitePatterns | Trehalase signature 2. | 475 | 484 | IPR018232 | GO:0004555(InterPro)|GO:0005991(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g1990 | K01194 | - | csv:101208719 | 1040.8 |