Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2058 | ATGGCGACCGAGATCTCGGCCGTTGCAGCCGCCGCCACGTACCGGTTTAATCAGGCGAGACGGATCTTCCCGGTGGCAGACCCGAAACAGAGGCTGGCCGGAGCCCCACGTCTGGTTTTTTGGAATCGGTTTCCATGGCGGTGCTTTTCGAAACAGAGCTCGAGAAGATGGTTGGGCGTGAAGAAGAAAGGTAGAGAAGATGAAGTTGGTGAAGTTGAAATGGTGAAGGGATTGAAGCTGAGTGTGGAGGAGAAAAGGGAGAGGAAGAAAGCCGAAAGAGATGCTTATCTTGTTGCTGCAATTGTTTCGAGCTTCGGGATCACGTCAATGGCTGCCATCGCTGTTTATTACAGATTCTCCTGGCAAATGGGGGACGGGGAGTTTCCATTTTTGGAAATGTTTAGCACTTTCGCACTCTCTGTGGGCGCTGCTGTGGGGATGGAGTTTTGGGCGAGATGGGCTCACAAAGAGCTTTGGCATGCTTCCTTATGGGAAATGCACGAGTCTCATCACAGGCCGAGGGATGGTCCATTTGAATTGAACGATGTGTTTGCAATTATCAATGCTTTGCCTGCGATTGCCCTTCTTTCATTTGGCTTCTTCAATAAAGGCTTCTTTCCTGGGCTCTGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGGATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCAGTGGGTCCCATAGCCGCTGTCCCCTATTTACGACGTGTCGCTGCTGCTCATCATCTTCATCACACGGACAAATTCGACGGAGTTCCGTACGGTTTGTTTTTAGGACCCAAGGAATTGGAAGAAGTGGATGGCGAGGAAGAGCTGCAGAAGGAAATTAAAAAGAGAAGCAAGGTTTACAGAAGTTAA | 897 | 50.28 | MATEISAVAAAATYRFNQARRIFPVADPKQRLAGAPRLVFWNRFPWRCFSKQSSRRWLGVKKKGREDEVGEVEMVKGLKLSVEEKRERKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQMGDGEFPFLEMFSTFALSVGAAVGMEFWARWAHKELWHASLWEMHESHHRPRDGPFELNDVFAIINALPAIALLSFGFFNKGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHLHHTDKFDGVPYGLFLGPKELEEVDGEEELQKEIKKRSKVYRS | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 36375730 | 36378096 | + | Lag0032696.1 | Lac11g2058 | 587916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2058 | 298 | Pfam | Fatty acid hydroxylase | 143 | 270 | IPR006694 | GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro) | |
Lac11g2058 | 298 | PANTHER | BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC | 59 | 296 | IPR045019 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2058 | Lac-Chr11:36375730 | Lac5g2972 | Lac-Chr5:47731516 | 2.30E-98 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2058 | K15746 | - | csv:101214325 | 410.223 |