Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2077 ATGGATGCGGCCGCGGTGGCGGTGACGGTGGCGGTGGCGATCGCGGTCGTGACCACGACCGCGTATTTGATTTGGTTCTTGAACATCAAACAGTCATTGAATGGGCCACGTGTCTGGCCTCTATTGGGCAGTCTTCCGGGACTGATTGAGAATAGTCACCGCATGCATGACTGGATTATGGAGAATCTCCGGTCAACAGGTGGCACGTACCAAACTTGCACGTGTGCCATTCCGTTCATGGCCAAAAAACAGGGTCTTGTGACGGTCACATGCGACCCGAAGAATTTGGAGCATATTTTGAAAACCCGGTTCGAGAATTACCCGAAAGGACCCAATTGGCAGGCTGTGTTTCATGATTTGCTTGGTGATGGAATCTTTAACTCCGATGGCGACACGTGGTTGTTCCAGCGTAAGACTGCTGCACTGGAATTTACCACCAGGACCCTTCGTCAAGCCATGGCTCGTTGGGTTAGCCGAGCTATTAAGTCTCGGTTTTGTCCGATTCTTGAGTCAGCTCAGCGTCGAGCTCAGCCGGTTGATCTTCAGGACCTTTTGCTTCGGCTGACATTCGATAATATTTGTGGGTTGACTTTCGGTAAAGATCCACAGACTCTCGCTCCTGACTTGCCCGAAAATGGCTTCGCTATGGCTTTTGACCGAGCCACCGAAGCCACATTGGGTCGCTTTATTTTGCCTAACTTCATATGGAAGCTGAAGAAATGGCTTCGGCTCGGGATGGAAGTGACGTTAACCCACAGCCTCGACCACACAGCTCAATACTTAACCAACATCATCGAGACACGTAAGCTTGAGCTATCCAATCAACAACACCAGAACGCCAATGGGACCCCACACGACGACTTGTTATCAAGGTTCATGAAAAGGAAAGAATCCTACTCAGACACATTCCTCCAACACGTGGCGCTCAACTTCATCCTAGCTGGACGCGACACGTCGTCCGTCGCGCTGAGCTGGTTCTTTTGGCTAGTCACCCAAAACCCAAGAGTGGAAGAGAAAATCCTCGTGGAAATCTGCACCGTACTAATGAAGACACGTGGCAAAGAGACCTCCACGTGGATCGAAGAGCCATTGAGCTTTGAAGAAGTGGACCGATTAATTTACCTCAAAGCCGCCTTGTCGGAAACTCTCCGGCTCTACCCATCAGTGCCGCAAGATTCAAAACACGTAGTGAACGACGACGTTTTACCCACCGGAGCTTTCGTTCCGGCTGGCTCTTCCATCACGTATTCGATTTACTCCGTCGGCCGAATGAAGTTCATATGGGGAGAGGATTGCTTAGAATTCAAACCGGAGAGATGGCTGGCTAATTCAGATGGAATGAAGAAATTTGAGCTTCAAAATGCTTATAAATTCGTTGCGTTTAATGCTGGGCCGAGAATTTGTTTGGGCAAAGATTTGGCTTACTTGCAGATGAAGTCGATTGCGGCGGCGGTGTTGCTCCGGCACCGCCTGACGGTGGCGGCGGGCCACCGTGTGGAGCAGAAGATGTCGTTGACGTTGTTCATGAAACATGGGCTTAAAGTTCACTTGCATCCGAGAGATTTGGGCCGTGTGGTGGAGAACATTAGCAAGACAGCGGCGGAGACGGTGGCGGTGGCGGTGGCAGTGGCGGCTGCTTGA 1641 51.07 MDAAAVAVTVAVAIAVVTTTAYLIWFLNIKQSLNGPRVWPLLGSLPGLIENSHRMHDWIMENLRSTGGTYQTCTCAIPFMAKKQGLVTVTCDPKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKSRFCPILESAQRRAQPVDLQDLLLRLTFDNICGLTFGKDPQTLAPDLPENGFAMAFDRATEATLGRFILPNFIWKLKKWLRLGMEVTLTHSLDHTAQYLTNIIETRKLELSNQQHQNANGTPHDDLLSRFMKRKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVTQNPRVEEKILVEICTVLMKTRGKETSTWIEEPLSFEEVDRLIYLKAALSETLRLYPSVPQDSKHVVNDDVLPTGAFVPAGSSITYSIYSVGRMKFIWGEDCLEFKPERWLANSDGMKKFELQNAYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHRVEQKMSLTLFMKHGLKVHLHPRDLGRVVENISKTAAETVAVAVAVAAA 546
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 36645245 36646885 + Lag0032715.1 Lac11g2077 587935
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2077 546 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 PANTHER CYTOCHROME P450 20 513 - -
Lac11g2077 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g2077 546 Gene3D Cytochrome P450 28 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 FunFam Cytochrome P450 27 523 - -
Lac11g2077 546 SUPERFAMILY Cytochrome P450 30 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2077 546 CDD CYP86A 73 513 - -
Lac11g2077 546 Pfam Cytochrome P450 35 511 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0476 Lac-Chr11:4952055 Lac11g2077 Lac-Chr11:36645245 1.00E-123 dispersed
Lac11g2077 Lac-Chr11:36645245 Lac7g2817 Lac-Chr7:47278181 1.70E-195 dispersed
Lac11g2077 Lac-Chr11:36645245 Lac12g1712 Lac-Chr12:32960627 3.70E-235 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2077 K15398 - csv:101216733 929.858