Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2099 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCTGCTTCTTATTACATACATAGGGGAGGAGGGGTTGGTGGCTCTGGATCAGGGCTGCCTACGGCCGGATCACATGCCTCCCCTGTATTCCGGCCAATGGCTAACCAGGCTGGAGTGAACTCTGGTGAGCCTGTAAAGAAGAAGAGAGGGAGACCAAGGAAATATGCTCCAGATGGGCAGGTCTCATTGGGTCTGTCTCCCATGTGTACCGGTTCTAAGCTCACTCCAGGTTCGAATTCGTCGACCCCGAGACGTCGAAGAGGGCGGCCGCCTGGTTCTGGAAGGAAACAACAATTAGCCCTTCTTGGTGAGTGGATGAACAATTCAGCTGGACTAGCTTTTGCCCCTCATGTCATTCACGTTGGAGCTGGAGAAGACATTGTGGCAAAAGTATTGTCGTTTGCACAGCAGAGGCCAAGGGCTGTTTGCATCCTGTCAGGCAACGGTACCGTTTCTTCAGTAACACTTCGTCAGCCTGCATCTACTGGTGTGAGCGTCACATATGAGGGTCATTTCCAGATATTGTGCTTATCTGGTTCTTACTTGGTGGCTGAAGATGGTGGTCCTCGAAATAGGACGGGCGGTATTAGTGTTTCCCTCTCTAGTCCTGATGGTCATGTCATTGGTGGCGGTGTTGCCGTTCTTATGGCAGCTGGCCCTGTTCAGGTAGTTGTATGTAGTTTTGTTTATGGTGCAAAGATTAAGAACAAGCAGGTGGCTGGTCCGAAAAGCAACGATGGTTCCGAAAATGACCACCATGATCATTTGGTTTCGCCCACCAGTGCCCCATCTGCCCAAACCTACAATCCATCTGCAATTGGTGTTTGGCCTGGTTCCCGTTCGGTCGATGTGAGAAACCCCCATACTGGAATTGATTTGACGCGAGGATGA 927 51.24 MDGREGMALSGGSASYYIHRGGGVGGSGSGLPTAGSHASPVFRPMANQAGVNSGEPVKKKRGRPRKYAPDGQVSLGLSPMCTGSKLTPGSNSSTPRRRRGRPPGSGRKQQLALLGEWMNNSAGLAFAPHVIHVGAGEDIVAKVLSFAQQRPRAVCILSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRNRTGGISVSLSSPDGHVIGGGVAVLMAAGPVQVVVCSFVYGAKIKNKQVAGPKSNDGSENDHHDHLVSPTSAPSAQTYNPSAIGVWPGSRSVDVRNPHTGIDLTRG 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36906405 36912487 + Lag0032737.1 Lac11g2099 587957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2099 308 MobiDBLite consensus disorder prediction 77 98 - -
Lac11g2099 308 ProSiteProfiles PPC domain profile profile. 123 264 IPR005175 -
Lac11g2099 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 241 - -
Lac11g2099 308 MobiDBLite consensus disorder prediction 269 286 - -
Lac11g2099 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 240 IPR005175 -
Lac11g2099 308 CDD DUF296 128 240 IPR005175 -
Lac11g2099 308 Gene3D - 128 253 - -
Lac11g2099 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 261 IPR039605 GO:0003680(InterPro)
Lac11g2099 308 MobiDBLite consensus disorder prediction 1 108 - -
Lac11g2099 308 MobiDBLite consensus disorder prediction 251 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2099 Lac-Chr11:36906405 Lac12g1743 Lac-Chr12:33386702 7.60E-76 dispersed
Lac11g2099 Lac-Chr11:36906405 Lac6g0075 Lac-Chr6:678997 1.80E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2099 - - - 0.0