Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2103 | ATGTTGAGGTTTCCGCGGCGGAAACGCTCGCCGGAGGCAACAGAGGAGAGTGCAAATACTGCAGCGATTATCGACGACAACGAGACGGCGGCGGCGGCGGCGGCGGCCAAGGCGGTGCTCTGTGTTTCCGGCATGAGTTGCTCTGCCTGCGCTGTTTCTGTCGAGAATTCCGTCAAACAACTTCCAGGCATTCTCGATGCCGCCGTCGATTTCTTGAACGATAGGGCTCAAATCCTCTTTCTCCCCAATCTCATCGACGAAGATACAATACTTAAGGCAATTGAAAATGCTGGATTTCAAGCTTCGATATCGAAGGACGGGACCGAGCATCGATCGCGAGAAGTATGTCGAATCCGAGTAAATGGGATGGGCTGCAATTCTTGCTCTTCCATGGTAGAGTCAGTTTTGGAAGAAATGTATGGAGTACAAAAGGCTCACATTGCTCTGTTGAAAGAGGAAGCAGAAGTTCACTATGATCCAAAGGTTGTTAATTGCAGTCAGTTCATTGTAGCCATACAAGATATTGGCTTTGAAGCCTTACTTATAACCATTGGTGAACACATTAGCAAGATTGAGCTTAAGGTTGATGGTATGCATAACGAAAACTCGACCGCAAAAGTTAAAGAATCACTCGAATCCGTCCCGGGAATCGAAGATGTCGATATCGATATGTCATTGAGCAAAGTTACCATATCCTATAGGCCTGATATAACGGGACCTAGAAGTTTCCTCGAAGTCATCGAGTCGATCAAATCCGAGCATTTCAAGACAACGATATATCCCGAAGAAGTGGGACGAGAAACTCGTAAGGAGAAAGAAATTAGGCAGCATTATAAGTACTTTTTGTGGAGCTCTGCTCTCTCTATTCCTGTTTTCTTAACATCTATGGTCTTCATGTATATACCTGGAATCAAGCAGACATTAGATATCAAAGTAGTCAATATGATGAATGTTGGACAGATTATCCGATGGAATTTGTCGACTCCGGTGCAGTTCGTCATAGGTTCGAGATTCTACGTCGGATCGTATAAAGCGTTGCGGCGTGGTTCTGCCAACATGGATGTATTGATTACATTGGGAACAAATGCAGCTTATTTCTATTCTGTCTATATAGTGCTAAGAGCAGCTACATCCCCTGCTTTCAATGGAACTGATTTCTTTGAGACTAGTTCAATGTTGATCACATTCATTCTACTTGGTAAGTATTTGGAGGTTTTGGCAAAGGGAAAGACCTCTGAGGCCATTGCCAAGCTTAAGCACTTGGCTCCCGAGACGGCGACGCTCTTGACGCTCGATGGCCATGGAAATGTCATTGGCGAAGTGGAAATCAGTAGTGAGCTGATTCAAAAGAATGATGTTATTAAGATTACACCAGGTGCGAAAGTAGCTTCTGATGGTCTCGTCGTATGGGGCGAAAGTCATGTCAATGAGAGTATGATCACCGGAGAAGCGAAACCGGTTGCGAAAAGGACCGGCGACAAGGTGATAGGAGGAACTGTGAATGAGAATGGGGTATTGCATATAAAGGCAACACATGTCGGATCGGAGAGTTCTTTAGCGCAAATCGTTCGACTCGTCGAATCGTCTCAGTTGGCGAAAGCTCCTATTCAGAAATTTGCAGACCATATCTCTAAGTATTTTGTGCCTCTGGTAATTTCACTTTCTTTTCTCACTTGGATTGCCTGGTTTTTAGCTGGAAAGTTGCATCTCTATCCTAAGTCCTGGTTGCCTTCTTCAATGGACAGTTTTGAGCTTGCTCTCCAATTTGGGATTTCTGTTATGGTCATTGCTTGCCCTTGTGCCCTCGGCCTCGCCACCCCAACCGCCGTGATGGTCGGTACCGGTGTCGGTGCATCTCAAGGTGTTCTAATCAAAGGTGGTCAAGCATTAGAATTTGCACACAAGGTGAGTTGCATTGTGTTTGACAAGACAGGAACATTAACAATTGGAAAGCCAGTGGTTGTAAATGTAAGACTTATGGACACTATAGTACTTGAGGAACTTCTTGAACTCACTGCTGCAACTGAGGTGAACAGTGAGCACCCAGTGGCCAAGGCCATTGTTGAATATGCCAAGCAATTCAAGGAAGAACAGAACCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCACTGTAAGGAACAAGAAAGTAATGGTTGGAAACAAGAGCTTGATGATGAACAATGACATAGAAATTCCGGGGGAAGCGGAAAGCTTCATCGTCGACGCTGAAGGCATGGCGCAAACTGCGGTTTTCGTGGCCATAGATCGGACGGTGTCGGGAGTTATTGCGGTGTCCGATCCGTTGAAACCGGGCGCCAAAGAAGTCATCTCCATTCTCAAGTCTATGGAAGTAAAGAGCATCATGGTAACAGGTGACAATTGGGGAACTGCACATTCCATTGCCAAACAAGTTGGAATTGAAACAGTCATTGCAGAGGCCAAGCCTCAGCAGAAAGCAGAGGAAGTGAAGAATCTTCAGACAGCGGGACACACGGTGGCGATGGTGGGAGACGGGATCAACGACTCGCCTGCCCTTGTAGCGGCCGATGTCGGGATGGCGATCGGAGCTGGCACGGACATTGCCATTGAGGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACTGCCATTGATCTTTCAAGAAAAACCTTTGCTAGAATTCGCTTGAATTACATTTGGGCTCTTGGCTATAATCTTCTGGCCATTCCAATAGCCGCAGGCGTCTTGTTCCCTTCGACTCGGTTTCGGCTACCGCCGTGGATCGCCGGAGCTGCCATGGCAGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACCAGAGACCAAAGAAGCTTGATGAAGTTGAGATTCAAATGAAAGGAATAGTGGTTGAATGA | 2928 | 46.11 | MLRFPRRKRSPEATEESANTAAIIDDNETAAAAAAAKAVLCVSGMSCSACAVSVENSVKQLPGILDAAVDFLNDRAQILFLPNLIDEDTILKAIENAGFQASISKDGTEHRSREVCRIRVNGMGCNSCSSMVESVLEEMYGVQKAHIALLKEEAEVHYDPKVVNCSQFIVAIQDIGFEALLITIGEHISKIELKVDGMHNENSTAKVKESLESVPGIEDVDIDMSLSKVTISYRPDITGPRSFLEVIESIKSEHFKTTIYPEEVGRETRKEKEIRQHYKYFLWSSALSIPVFLTSMVFMYIPGIKQTLDIKVVNMMNVGQIIRWNLSTPVQFVIGSRFYVGSYKALRRGSANMDVLITLGTNAAYFYSVYIVLRAATSPAFNGTDFFETSSMLITFILLGKYLEVLAKGKTSEAIAKLKHLAPETATLLTLDGHGNVIGEVEISSELIQKNDVIKITPGAKVASDGLVVWGESHVNESMITGEAKPVAKRTGDKVIGGTVNENGVLHIKATHVGSESSLAQIVRLVESSQLAKAPIQKFADHISKYFVPLVISLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKVSCIVFDKTGTLTIGKPVVVNVRLMDTIVLEELLELTAATEVNSEHPVAKAIVEYAKQFKEEQNPIWPEAQEFISIPGHGVEATVRNKKVMVGNKSLMMNNDIEIPGEAESFIVDAEGMAQTAVFVAIDRTVSGVIAVSDPLKPGAKEVISILKSMEVKSIMVTGDNWGTAHSIAKQVGIETVIAEAKPQQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIDLSRKTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYQRPKKLDEVEIQMKGIVVE | 975 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 36935308 | 36947238 | - | Lag0032741.1 | Lac11g2103 | 587961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2103 | 975 | SUPERFAMILY | HMA, heavy metal-associated domain | 184 | 251 | IPR036163 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | ProSiteProfiles | Heavy-metal-associated domain profile. | 189 | 255 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Gene3D | - | 607 | 901 | IPR023214 | - | |
Lac11g2103 | 975 | Gene3D | - | 725 | 775 | IPR023299 | GO:0000166(InterPro) | |
Lac11g2103 | 975 | Gene3D | - | 647 | 724 | IPR023299 | GO:0000166(InterPro) | |
Lac11g2103 | 975 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 20 | 969 | - | - | |
Lac11g2103 | 975 | CDD | HMA | 118 | 179 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | CDD | HMA | 192 | 258 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Pfam | E1-E2 ATPase | 421 | 618 | - | - | |
Lac11g2103 | 975 | FunFam | ATPase copper transporting beta | 110 | 183 | - | - | |
Lac11g2103 | 975 | SUPERFAMILY | HMA, heavy metal-associated domain | 114 | 185 | IPR036163 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 867 | 879 | - | - | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 476 | 490 | - | - | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 844 | 863 | - | - | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 791 | 801 | - | - | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 640 | 654 | - | - | |
Lac11g2103 | 975 | PRINTS | P-type cation-transporting ATPase superfamily signature | 769 | 780 | - | - | |
Lac11g2103 | 975 | NCBIfam | heavy metal translocating P-type ATPase | 353 | 953 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Lac11g2103 | 975 | SUPERFAMILY | Calcium ATPase, transduction domain A | 440 | 526 | IPR008250 | - | |
Lac11g2103 | 975 | NCBIfam | HAD-IC family P-type ATPase | 393 | 926 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac11g2103 | 975 | Gene3D | - | 408 | 530 | - | - | |
Lac11g2103 | 975 | SUPERFAMILY | HAD-like | 639 | 950 | IPR036412 | - | |
Lac11g2103 | 975 | Gene3D | - | 190 | 259 | - | - | |
Lac11g2103 | 975 | Gene3D | - | 29 | 109 | - | - | |
Lac11g2103 | 975 | SFLD | C1.7: P-type atpase like | 622 | 896 | - | - | |
Lac11g2103 | 975 | Pfam | haloacid dehalogenase-like hydrolase | 637 | 858 | - | - | |
Lac11g2103 | 975 | FunFam | Copper-transporting ATPase HMA5 | 35 | 106 | - | - | |
Lac11g2103 | 975 | FunFam | Copper-transporting ATPase 1, putative | 408 | 530 | - | - | |
Lac11g2103 | 975 | CDD | HMA | 42 | 102 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | ProSiteProfiles | Heavy-metal-associated domain profile. | 114 | 180 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | ProSiteProfiles | Heavy-metal-associated domain profile. | 36 | 102 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | PRINTS | Copper-transporting ATPase 1 signature | 37 | 62 | - | - | |
Lac11g2103 | 975 | PRINTS | Copper-transporting ATPase 1 signature | 92 | 112 | - | - | |
Lac11g2103 | 975 | PRINTS | Copper-transporting ATPase 1 signature | 63 | 86 | - | - | |
Lac11g2103 | 975 | PRINTS | Copper-transporting ATPase 1 signature | 138 | 159 | - | - | |
Lac11g2103 | 975 | NCBIfam | copper ion binding protein | 118 | 179 | IPR006122 | GO:0005507(InterPro) | |
Lac11g2103 | 975 | SFLD | p-type atpase | 622 | 896 | IPR044492 | - | |
Lac11g2103 | 975 | CDD | P-type_ATPase_Cu-like | 281 | 940 | - | - | |
Lac11g2103 | 975 | ProSitePatterns | Heavy-metal-associated domain. | 120 | 150 | IPR017969 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Pfam | Heavy-metal-associated domain | 193 | 251 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Pfam | Heavy-metal-associated domain | 118 | 178 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Pfam | Heavy-metal-associated domain | 42 | 99 | IPR006121 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | ProSitePatterns | Heavy-metal-associated domain. | 42 | 71 | IPR017969 | GO:0046872(InterPro) | |
Lac11g2103 | 975 | Gene3D | - | 110 | 181 | - | - | |
Lac11g2103 | 975 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 385 | 923 | IPR023298 | - | |
Lac11g2103 | 975 | FunFam | Probable copper-transporting ATPase HMA5 | 748 | 901 | - | - | |
Lac11g2103 | 975 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 642 | 648 | IPR018303 | - | |
Lac11g2103 | 975 | SUPERFAMILY | HMA, heavy metal-associated domain | 36 | 105 | IPR036163 | GO:0046872(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2103 | Lac-Chr11:36935308 | Lac1g1655 | Lac-Chr1:37869389 | 0.00E+00 | dispersed | |
Lac11g2103 | Lac-Chr11:36935308 | Lac6g2287 | Lac-Chr6:40109952 | 1.30E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2103 | K17686 | - | csv:101220448 | 1684.46 |