Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2233 ATGGAACCCAGTTCCAATTTCCTTCAAAGTCTCATCGAATCCCTCAATCTCTTGTTTCCATGGCAGTGGATCGAAAACGCCGATAACCAAACGCGCTATCTTCTCACCCTCTCCACCGGGCTTCTAGTTCTCTTTTACGTCAAATATTGGCGGCGGCGATTGCGGCTGCCGCCGGGTCCTCCCGTCGTTCCACTGATCGGAAATCTTCCGTTTCTCGATCCAGAGCTTCACACTTACTTCAGGGAGTTGGGTAAAAAATACGGCCCAATTGTAAAGCTCCAACTCGGCAGGAAGATTGCCATAGTCGTCAACTCACCCTCCGTGGCACGTGAGATGTTGAAGGACAACGATATCACGTTCGCCAACCGCGACATTTCTCAGGCCGGGAGAATCGCCACGTACGGCGGTTACGACATAACTTGGACCCCGTACGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTGTGCTGAAGATGCTGAACAACGCCACGTTGGACTCTGTGTACGAGCTCCGGCGTAGAGAGGTGAGAAACACCGTGGCTCACCTGTACCGGCGAGCCGGGTCGGCGGTGAACATGGGAGAGCAGGGCTTTTTGACCATTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGGTCGTCAGTGGAAGGGGACGAGAGGGACGCGGTTGCGGCTGAGTTAAGAGAGATGGTTTCGGACATAACTGAGCTGCTGACTAAACCTAATATTTCGGACTTCTTCCCGAGCTTGGCCCGTTTCGATCTCCAAGGAATTGAGAAGCAAATGCTTGAGCTTGTCCCAAGATTTGATACCATCTTCGAAAAGATGATTGACCAACGATTGAGAATGGCCGATGGGGACGAGAATGCGAAGACGAATGATTTCTTGCAGTTCTTACTAAAGGTCAAAGATGAAGGCGATTCCAAAACACCTCTCACTATGGTCCAACTCAAAGCCTTGCTCATGGATATGGTAATAGGTGGAACGGACACATCCTCAAACACCATTGAGTTTGCAATGGCGGAGATGATGAAGAACCCAAGAGTTCTAAGGAAAGCCCAGGAAGAGCTAGCCGCTGTGGTCGGAGAAGACAACATCGTAGAAGAGTCCCATATTCAGAGCTTGCCATATCTCAAAGCCGTAATGAAAGAAACCTTGCGTCTGCATCCAGCTCTGCCGCTGCTTGTGCCGCACTGCCCGAGCGAGACCGCCATCATCTCCAATTACGTAGTCCCAAAGGGCTCTCGAGTGTTCATCAACGTCTGGGCCATTCAGCGAGACCCCGAACAGTGGGAAAACCCTTTGGAGTTCGACCCAGACAGGTTCTTGAATAGTAAGTGGGATTTCAGTGGGAGTGATTTTCGTTACTTTCCATTCGGAGCTGGCAGAAGAAACTGCATTGGGGTAACCATGGCGGAAAGAACGTTCATGTATTTACTTGCTACGCTTCTTCATTCGTTCGATTGGAGATTGAAAGAAGGTGAGAAATTGGAGACTGAGGAGAAATTTGGGACTGTTTTGAAGAAGAAGACGCCTCTGGTCGCCATCGTGACGCCCAGACTATCTAATCCCACTCTATACCAGTAA 1587 50.28 MEPSSNFLQSLIESLNLLFPWQWIENADNQTRYLLTLSTGLLVLFYVKYWRRRLRLPPGPPVVPLIGNLPFLDPELHTYFRELGKKYGPIVKLQLGRKIAIVVNSPSVAREMLKDNDITFANRDISQAGRIATYGGYDITWTPYGPEWRMLRKVCVLKMLNNATLDSVYELRRREVRNTVAHLYRRAGSAVNMGEQGFLTIFNVVTSMLWGGSSVEGDERDAVAAELREMVSDITELLTKPNISDFFPSLARFDLQGIEKQMLELVPRFDTIFEKMIDQRLRMADGDENAKTNDFLQFLLKVKDEGDSKTPLTMVQLKALLMDMVIGGTDTSSNTIEFAMAEMMKNPRVLRKAQEELAAVVGEDNIVEESHIQSLPYLKAVMKETLRLHPALPLLVPHCPSETAIISNYVVPKGSRVFINVWAIQRDPEQWENPLEFDPDRFLNSKWDFSGSDFRYFPFGAGRRNCIGVTMAERTFMYLLATLLHSFDWRLKEGEKLETEEKFGTVLKKKTPLVAIVTPRLSNPTLYQ 528
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 38369189 38371491 - Lag0032871.1 Lac11g2233 588091
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2233 528 FunFam Predicted protein 325 515 - -
Lac11g2233 528 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 SUPERFAMILY Cytochrome P450 57 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 CDD CYP76-like 85 516 - -
Lac11g2233 528 PANTHER OS08G0547900 PROTEIN 33 528 - -
Lac11g2233 528 Gene3D Cytochrome P450 49 524 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 Pfam Cytochrome P450 57 511 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2233 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2233 Lac-Chr11:38369189 Lac11g2235 Lac-Chr11:38413453 3.50E-206 dispersed
Lac11g2232 Lac-Chr11:38358842 Lac11g2233 Lac-Chr11:38369189 1.80E-247 tandem
Lac11g2233 Lac-Chr11:38369189 Lac11g2234 Lac-Chr11:38394344 1.50E-249 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2233 - - - 0.0