Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2234 ATGGAACCCACTTCCAATTTCCTTCAAACTCTCAATGATTCCGACAATTCCACGCGCTTTCTTCTCACCCTCTTCGCCGGTTTTCTTCTCCTTCTTCTTTATCTCAAATTCTTGCGGCGGCGCTTGCGGCTGCCACCGGGTCCCCGGGGCGTTCCGCTGCTCGGAAATCTGCCGTTTCTCGACCCCGAACTTCACACTTACTTCACCCAACTGGGCCGGAAATACGGTCCGATTGTAAAGCTGCAACTCGGCAGTAAGATCGGCATAATCGTCAACTCACCCTCCGTGGCACGTGAGGTCTTGAAAGACCACGATGTCACGTTCGCCAATCGCGACGTTCCTCAGGCCGGCAGAGCCGCCACGTACGGCGGTCACGACGTAACTTGGACCCCGTACGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACGATCAAGATGCTCAGCAACGCCACGCTGGACTCTGTGTACGAGCTCCGGCGTCGAGAGGTGAGAAACACCGTGGCTCATCTGTACCGGCTGGCTGGGTCGCCGGTGAACATCGGAGAGCAGGGCTTTTTGACCATTTTCAACATCGTTACGAGCGTGTTGTGGGGTGGGTCGGTGGAAGGGGACGAGAGGGACCGAGTTGCGGCCGAGTTCAGAGAGACGGTTTCGGACATAACTGAGTTGCTGGGTAAGCCTAACGTTTCGGACTTTTTTCCGAGCTTGGCTCGATTCGATCTCCAAGGCGTTGAGAAGCAAATGCTTGAGCTCGTCCCGAAATTCGACAACATCTTCGAAAAGATGATCGATGAGCGACTGAAAATGGGCGGTGGGGACGAGAGTGGGAAGAAAAATGATTTCTTGCAGTTCTTACTAAAGGTCAAAGATGAAGGCGATTCCAAAACACCTCTCACTATGGTCCAACTCAAAGCCTTGCTCATGGATATGGTCGTAGGGGGAACAGAAACATCCTCAAACACCATTGAGTTTGCGATGGCGGAGATGCTAAAGAACCCAGAAGTTCTAAAGAAAGCCCAGCAAGAAGTAGCCGCTGTGGTCGGAGAAGACAACATCGTAGAAGAGTCCGATACTCAAAGCTTGCCATATCTGAAAGCCGTAGTGAAAGAAACCTTTCGTCTGCATCCACCTCTGCCGCTGCTTGTGCCGCACTCCCCGAGCGAGACCACCATCGTCTCCAATTACGCAGTCCCAAAGGGCTCTCGAGTGTTCATCAACGTCTGGGCCATTCATCGAGACCCCGATCACTGGGAAAACCCTTTGGAGTTCGACCCAGACAGGTTCTTGAATAGTAACTGTGATTTCAGTGGGAGTGATTTTCGTTTCCTTCCATTTGGAGCTGGCAGAAGAAACTGCGCAGGGATAGCCATGGCCGAGAGAATGTTGATGCATGTTCTTGCCACGCTTCTGCATTCGTTTGATTGGAAATTGAAAGAAGGCGAGAGATTGGAGACTGAGGCCAAGTTTGGGATTGTTTTGAAGAAGAAAACGCCTCTCGTTGTCATATTGACGCCTACGCTATCTAACCCCACTCTATACCAGTAA 1548 51.81 MEPTSNFLQTLNDSDNSTRFLLTLFAGFLLLLLYLKFLRRRLRLPPGPRGVPLLGNLPFLDPELHTYFTQLGRKYGPIVKLQLGSKIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAATYGGHDVTWTPYGPEWRMLRKVCTIKMLSNATLDSVYELRRREVRNTVAHLYRLAGSPVNIGEQGFLTIFNIVTSVLWGGSVEGDERDRVAAEFRETVSDITELLGKPNVSDFFPSLARFDLQGVEKQMLELVPKFDNIFEKMIDERLKMGGGDESGKKNDFLQFLLKVKDEGDSKTPLTMVQLKALLMDMVVGGTETSSNTIEFAMAEMLKNPEVLKKAQQEVAAVVGEDNIVEESDTQSLPYLKAVVKETFRLHPPLPLLVPHSPSETTIVSNYAVPKGSRVFINVWAIHRDPDHWENPLEFDPDRFLNSNCDFSGSDFRFLPFGAGRRNCAGIAMAERMLMHVLATLLHSFDWKLKEGERLETEAKFGIVLKKKTPLVVILTPTLSNPTLYQ 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 38394344 38396831 - Lag0032872.1 Lac11g2234 588092
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2234 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 Gene3D Cytochrome P450 35 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 CDD CYP76-like 73 503 - -
Lac11g2234 515 FunFam Predicted protein 312 502 - -
Lac11g2234 515 Pfam Cytochrome P450 45 499 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g2234 515 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2234 515 PANTHER OS08G0547900 PROTEIN 18 515 - -
Lac11g2234 515 SUPERFAMILY Cytochrome P450 45 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2230 Lac-Chr11:38343552 Lac11g2234 Lac-Chr11:38394344 6.30E-131 dispersed
Lac11g2232 Lac-Chr11:38358842 Lac11g2234 Lac-Chr11:38394344 2.00E-241 dispersed
Lac11g2234 Lac-Chr11:38394344 Lac12g2491 Lac-Chr12:41936321 1.40E-98 dispersed
Lac11g2233 Lac-Chr11:38369189 Lac11g2234 Lac-Chr11:38394344 1.50E-249 tandem
Lac11g2234 Lac-Chr11:38394344 Lac11g2235 Lac-Chr11:38413453 3.10E-199 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2234 - - - 0.0