Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2235 ATGGAACCCACCTCCCATTTCCTTCAAATTAGTCTCTTTGATTCTTTAAGTTTCTTGTTTCCATGGCGGTGGATTGACAATGGCTATAACCAATCGCTTTTTCTTTCCACGTTCTTTGCTGGTTTTCTAGTTTTTCTTTACACTAAAACTCGGCGGCGCTGCTTGGCGCCGCCGCCGCCGCCGGGTCCACGTGGGATTCCGCTACTCGGAAATCTTCCATTTATGAAACCAGAACTCCACACTTATTTTACCGAACTCGGTCAGAAATACGGCCCAATCGTAAAGCTCCAACTTGGTAGCAAGATTTGTATAGTGGTGAACTCGGCCTCTGTGGCACGTGAAGTTCTCAAGGACCACGACCTCACCTTCGCCAACCGCGACGTTCCTTTCGTCGGCAAAGCCTCTTCCTACGGCGGCTGCGATATACTTTGGAGCCCCTATGGACCCGAATGGCGGATGTTGAGAAAAATAAGCATGGTCCATATGCTTAGTAACGCCGCTTTGGACTCCGTTTGTGAGCTTCGACGGAGAGAGGTTAGAAACACCGTGCGTTATTTTTATAGTCAAATTGGGTGTCCGATTGATGTAGGAGAGCAAAGTTTTGTGACGTTGCTTAATGTCTTTACTGCTATGCTTTGGGGCGGGACGGTGGACGGAGAAGAGAGGAAGAGTATTGGGGCGGAGCTGAGAGAGGCGGCGGCGGAGATGGTAGACTTATTGATGAAACCTAATGTTTCCGACTTCTTTCCGAGATTGGCGCGTTTCGATATCCAAGGAATCGAGAAGCGAATGCTTGAATTAGTCCGGAGATATGACAATATCTTTACCAAAATCATCGATCAAAGATTGGAAATTGCCAATAAGGGTGGCGGTGCAAGTGCACAAGAAAAGGATTTCTTGCAGTTCTTGCTGGAGAAGAAAGATGAAGGAGATTCCAAGATTCCTTTCACCTCCAACCATCTTAAAGCCTTGCTCATGGACATGGTTATTGGCGGGACAGACGCACCGTCAAGCATCGTAGAGTTTGCGATGGCTGAGATAATGAAGAACCCACAAATTCTCAAAAAAGCACAACAAGAATTGGCTGCCGTCGTTGGAGAAGAGAACATCGTAGAAGAGTCCCACATTCAAAGTTTGTCATATCTTCAAGCCATAATGAAAGAAACCCTACGTTTTCATCCAGCGCTGCCATTGCTGGCCCCTCACAGCCCAACGGAGACCACTGTCATCTCCAACTACACAATCCCCAAGGCCTCTCAAGTTCTAATTAACGCGTGGGCGATTCACCGAGACCCGTGCTCTTGGGACAAGCCATTAGAGTTCAAGCCGGCGAGGTTTCTGAATAATACAAGTTTGGATTACAATGGGAGCAATTTCTCTTACATTCCCTTCGGGTCTGGCAGAAGAATGTGTGCTGGGATAGCCATGGCGGAGAGGATTGTTTTGTATTTACTTGCTACGATGTTGCATTCATTTGATTGGAAGCTGAAAGAAGGTGAGAAACTAGATGTTTCAGAGAAGTTTGGGACTGTGTTGAAGAAAAACACGCCTCTTGTCGCCATTCCGACCCTGAGACTGGCTAACCCATCTCTCTATCAGTGA 1602 47.19 MEPTSHFLQISLFDSLSFLFPWRWIDNGYNQSLFLSTFFAGFLVFLYTKTRRRCLAPPPPPGPRGIPLLGNLPFMKPELHTYFTELGQKYGPIVKLQLGSKICIVVNSASVAREVLKDHDLTFANRDVPFVGKASSYGGCDILWSPYGPEWRMLRKISMVHMLSNAALDSVCELRRREVRNTVRYFYSQIGCPIDVGEQSFVTLLNVFTAMLWGGTVDGEERKSIGAELREAAAEMVDLLMKPNVSDFFPRLARFDIQGIEKRMLELVRRYDNIFTKIIDQRLEIANKGGGASAQEKDFLQFLLEKKDEGDSKIPFTSNHLKALLMDMVIGGTDAPSSIVEFAMAEIMKNPQILKKAQQELAAVVGEENIVEESHIQSLSYLQAIMKETLRFHPALPLLAPHSPTETTVISNYTIPKASQVLINAWAIHRDPCSWDKPLEFKPARFLNNTSLDYNGSNFSYIPFGSGRRMCAGIAMAERIVLYLLATMLHSFDWKLKEGEKLDVSEKFGTVLKKNTPLVAIPTLRLANPSLYQ 533
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 38413453 38416513 - Lag0032873.1 Lac11g2235 588093
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2235 533 CDD CYP76-like 88 522 - -
Lac11g2235 533 Pfam Cytochrome P450 60 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 FunFam Putative cytochrome P450 superfamily protein 321 523 - -
Lac11g2235 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac11g2235 533 SUPERFAMILY Cytochrome P450 60 525 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 Gene3D Cytochrome P450 46 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac11g2235 533 PANTHER OS08G0547900 PROTEIN 34 533 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2233 Lac-Chr11:38369189 Lac11g2235 Lac-Chr11:38413453 3.50E-206 dispersed
Lac11g2235 Lac-Chr11:38413453 Lac3g0568 Lac-Chr3:4384681 1.00E-88 dispersed
Lac11g2234 Lac-Chr11:38394344 Lac11g2235 Lac-Chr11:38413453 3.10E-199 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2235 - - - 0.0