Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2287 ATGAAGATTGGAGCGATGGAAAATGTGGTGGTAATTGGAGGATTGATTGCGGTGCAGTTCGTCTACGCCGGAAACTCGGTATTACTGAGTTATTTGATGTCGTTAGGGCTCAGTCCTCTCACGGTTGTCATTTGTATTTCTTCTGCCACTTTTCTTTTTCTGTCTCCTCTCGCTGTTTGTTTTGAAAGGAACAGTTGGCCCAAGAAATTGAGTTTCAAGTTGCTGCTTCAGCTTGTTCTGATCTCCTTTGGCGGGGTAACTCTGTTCCAAACTCTGCAATTAGAAGGGATAAAGCTGACTTCTCCAGCCATGTCATCTGCCATGCCAAACCTTGCTCCTGGTCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTCAAACTTAGTTGTCTGTTCAGCAAAGTTAAGATTTTAGGGACATTGCTTTGTGTAGTAGGTGCTATCACAATGAGCATTCTGCAGAGCACCGTCACGATTCCGGCAAAGGAGCAGCTAACATCTTCACCTCTAACTGTACTCTTCAATAAGGAAAAGATTCTTGGTTGTTTGTATCTCATGGTGGCGGTCTTCATATTATCAAGTAATGTTGTATTGCAGGCTACAGCACTTGGTGAACTACCAGCTCCAATGTCGTTGAGTGCTGCAACGTCGTTCATTGGAGTGCTCACGACCGCAGCTGTACGACTGATGCAAAATCATAAGTTAGAAACCGATTGGTCGAATGTCAACATTAAGAATTTACTCTGCTACTCTCTATTGGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGTCCCATTGGAACAGTTTTCTCTGTCATTCTCTCTGTCTCCACCTTAGGAGACACTATTTCCATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTACTGTGATGGGAATGGCTATCACAGTGATGACTTTGATATTGAGAAACCTTTACTCTCTTGA 1047 43.27 MKIGAMENVVVIGGLIAVQFVYAGNSVLLSYLMSLGLSPLTVVICISSATFLFLSPLAVCFERNSWPKKLSFKLLLQLVLISFGGVTLFQTLQLEGIKLTSPAMSSAMPNLAPGLIFIIAWCFRLERVKLSCLFSKVKILGTLLCVVGAITMSILQSTVTIPAKEQLTSSPLTVLFNKEKILGCLYLMVAVFILSSNVVLQATALGELPAPMSLSAATSFIGVLTTAAVRLMQNHKLETDWSNVNIKNLLCYSLLGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSVSTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGNGYHSDDFDIEKPLLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 38947001 38950634 - Lag0032925.1 Lac11g2287 588145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2287 348 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020(InterPro)
Lac11g2287 348 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
Lac11g2287 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 153 - -
Lac11g2287 348 PANTHER WAT1-RELATED PROTEIN 16 328 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac11g2287 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2287 Lac-Chr11:38947001 Lac8g2482 Lac-Chr8:42723977 1.40E-30 dispersed
Lac11g2287 Lac-Chr11:38947001 Lac5g0392 Lac-Chr5:4123821 9.10E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2287 - - - 0.0