Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2471 | ATGTCGCTCCTCAGTAGATTCTTTTACAGAAGGCCCCCGGATGGGTTGCTGGAGTTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCCACTGAAGTATTGCCTGATGATATGTACCAAATATATCTGCATGAAATCGTAAATGAATTACATGAAGAATTCCCAGACTCGTCCTTCCTTGCATTTAATTTTCGTGAAGGAGAGAAAAGGAGCCAATTTTCAGAAATGTTGTGTGAGTATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCACTGTCCTTAATACAGCACTTCCTTCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATATCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTGGCATTTCTTTTGGCCAGCTTTTTGATATTTAGAAAACTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGCTTTTGCAGCTCTTGTCACCATTAAATCCATTCCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTTTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGCTGCAGACCAGTTATTCGTATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTTTCCACACAGATGATTTTCTCCATGCCCAAGAAGAACAAAGCCTTACGTCACTACCGTCAGGCAGAATGTGATGTGATCAAAATAGACGTCCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGGGAAGTTATGATGTTTCGTATTATGTTCAATACAGCATTTATTCGATCAAACATACTTATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCTGAGGTATTGTTTGGGGAGATAGAAAGCATCTCCCCTCCAAAGGCTCCAACCACAATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTTGAGTGGATTGATAACAATGATGATGCTGCCTTGTGGCTACTCAAGAATCTTTCTGCCTTGACTGACGTGAAAGAATTGTCGAGACTGCAAAATAAAACAAGTTCATACTCTTCGCCAGCGGATTCTGAAGAGGAAAATAATACTTCCAGCACAGCCGATAGTTCAGATGAAGTATTTGATAGTATGACAAAGCCTTTAGTTGATTCAACTTCTACCAATTTTACAATTCCAGCTATGGTACATTCTTCTGAATTATTGTCTGACAAGAGTGGTGCTAATGAAGTGAATATTTCATCAGAATCTCCTCAAACTTTTGATGAATGTGAAGACAAGATCTGTTCGATTAAAGAATCTCATCAACCCTCTTCATCACCTCCACTAACTTCTTTTGTCTCCCCACCCTCTCCTATAAGTTCTTTAATGCCATCACCATTGTTGCCTCCATCTAATCTACCATCTACTAATGCTAGTGGGGAACTTGTCTCAAATAAAATAACACCTATGGTTAAAGTGATTCCTCCACCGCCACCGCCGCCGCCACCTTTTTCTCTATCTCATAAGGAACCTCATGTAGAAACTTCCATGAGTTCAGACTTGACTTCTGTAACAATGCATGGGAGATCCCCTCCACCCCCTCCACCTCCACCTCTTATTAGCAACAATCCTGTTACGACCTCTTTGACTCCTTCACTTTTGATGATTCCTAAATCTTCTAGTCCTCCTCCACCCCCACCTCCACCTCCCCTCCCAAAAATAGGTGGTGTTCCACCTCCACCTCCACCTCCTATTCCAAAATCTTTTGGTGCTCCTCCACCTCCACCTCCTCCTCCTCCTTTTATTCCACAATCTTCTAGTGTTCCTCCACCTCCACCTCCAGTGCCAAAATCTTCTGGTGCTCCTCCACCTCCGCCTTCGGTTCCCAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTCCAAAATCTTCTAGTGCTCCTCCTCCCCCTCCTCCACCTCCTATTTCAAAGTCTTCTAGTGCTCTCCCACCTCCACCTCCACCTCCGCCTCCTATTCCAAAATTTTCTGGTGCTCCTCCACCTCCTCCTCCACCTCCTATTTCGAAGTCTTCTAGTGCTCCTCCACCTCCACCTCCTTTGCCACAATCAAATCGTGGTGCGACACCAATTCCACCTCCTCCCCCACCTAAACCTCCCGGCGGTGAGCTACCAAGTCATGGTACTAAATCAATTAGGCCTCCTCCACCCCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCAACAAGTCATAGTGCTACACCAATGCCACCCCCTCCCCTGGATCAAGAGGCTAGAGGTCGAGTTGCTACAGGAGTTGGAAATGCTCCAAAGAAAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAACCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGGCGTGGTTCCAACATCAACAAACCTGAAAAAGTGCAACTGATTGACTTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACATTGAAGGGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTTGAGCTAATGAAGGTCCCACGAATAGAGTCCAAGTTACGAGTATTTGCTTTCAAAATAACCTTTTCTAGTCAGGTGAAAGATTTGAGATATAATTTGAGCACAATAAATGATGCTACAAGAGAGGTCAAAGAATCTGCAAAATTGCGTCAGATAATGCAAACAATTCTTACACTGGGAAATGCATTAAACCAGGGTACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTGCAGAGAAAATGCCGGAGTTACTTGATTTTGACAAGGACCTTGTTCATTTGGAAGGTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACTGCTTCAGAAAACGACGGTGCTATCTCCGTTGGGTTCCAAAAGGTGCTGAAGAATTTTCTCGATACTGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAACGCAGATTCGTTGTCTCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTGTTTGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAACGAAGTTCAGTGAAAGCGAAATGTGAATATCAGATGTGTGATTTCATGGACTTCCATCAAGCTGAACATGAGGCAGTTTTGTTCCCAGGTTGGCTCTTCGCCTTCCTAGTTCGTGCATTGCCATCTCTTTCACCGATATCGTGCTCTGTAAATACGCTGTGA | 3849 | 43.65 | MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDDMYQIYLHEIVNELHEEFPDSSFLAFNFREGEKRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNIILLHCERGGWPLLAFLLASFLIFRKLHSGERKTLEIVHREAPKGLLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNKALRHYRQAECDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEIESISPPKAPTTILNGEEKGGLPIEAFSRVQELFSGVEWIDNNDDAALWLLKNLSALTDVKELSRLQNKTSSYSSPADSEEENNTSSTADSSDEVFDSMTKPLVDSTSTNFTIPAMVHSSELLSDKSGANEVNISSESPQTFDECEDKICSIKESHQPSSSPPLTSFVSPPSPISSLMPSPLLPPSNLPSTNASGELVSNKITPMVKVIPPPPPPPPPFSLSHKEPHVETSMSSDLTSVTMHGRSPPPPPPPPLISNNPVTTSLTPSLLMIPKSSSPPPPPPPPPLPKIGGVPPPPPPPIPKSFGAPPPPPPPPPFIPQSSSVPPPPPPVPKSSGAPPPPPSVPKSFGAPPPPPPPPPPPPKSSSAPPPPPPPPISKSSSALPPPPPPPPPIPKFSGAPPPPPPPPISKSSSAPPPPPPLPQSNRGATPIPPPPPPKPPGGELPSHGTKSIRPPPPPPPAKPFNAHPPTSHSATPMPPPPLDQEARGRVATGVGNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKGYTGDREMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVKDLRYNLSTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEGASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISVGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKKKIEKEAMKERSSVKAKCEYQMCDFMDFHQAEHEAVLFPGWLFAFLVRALPSLSPISCSVNTL | 1282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 40930121 | 40940673 | + | Lag0033109.1 | Lac11g2471 | 588329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2471 | 1282 | Coils | Coil | 1111 | 1138 | - | - | |
Lac11g2471 | 1282 | SMART | it6_source | 549 | 1276 | IPR015425 | - | |
Lac11g2471 | 1282 | Gene3D | - | 197 | 342 | - | - | |
Lac11g2471 | 1282 | Gene3D | Formin, FH2 domain | 832 | 1216 | IPR042201 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 883 | 903 | - | - | |
Lac11g2471 | 1282 | FunFam | Formin-like protein | 830 | 1216 | - | - | |
Lac11g2471 | 1282 | Pfam | Formin Homology 2 Domain | 835 | 1205 | IPR015425 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 502 | 524 | - | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 883 | 897 | - | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 581 | 595 | - | - | |
Lac11g2471 | 1282 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 339 | IPR035892 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 405 | 433 | - | - | |
Lac11g2471 | 1282 | PANTHER | FORMIN-J | 728 | 1228 | IPR051144 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 787 | 820 | - | - | |
Lac11g2471 | 1282 | Coils | Coil | 1205 | 1228 | - | - | |
Lac11g2471 | 1282 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 830 | 1230 | IPR015425 | - | |
Lac11g2471 | 1282 | Gene3D | Protein tyrosine phosphatase superfamily | 16 | 191 | IPR029021 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 492 | 824 | - | - | |
Lac11g2471 | 1282 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 610 | 780 | - | - | |
Lac11g2471 | 1282 | MobiDBLite | consensus disorder prediction | 544 | 560 | - | - | |
Lac11g2471 | 1282 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 905 | 1230 | - | - | |
Lac11g2471 | 1282 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Lac11g2471 | 1282 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 16 | 187 | IPR029021 | - | |
Lac11g2471 | 1282 | Pfam | C2 domain of PTEN tumour-suppressor protein | 198 | 338 | IPR014020 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2471 | Lac-Chr11:40930121 | Lac3g0209 | Lac-Chr3:1483722 | 7.60E-255 | dispersed | |
Lac11g2471 | Lac-Chr11:40930121 | Lac2g0546 | Lac-Chr2:4064488 | 4.30E-258 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2471 | K28090 | - | csv:101217517 | 1002.28 |