Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2477 ATGTTTGATTCTTTCTTCTTCTTCTTCATTTTGTTAGTTCCCTGCAAATCTTCTGAAATTTCTGCCGGTGGCCGGAGATTGCTTCACCAGCCCTTTTTCCCACTTGATTCTGTTCCTCCGGCGGAGCCGCCGTCGCCTCCGGTGCCGCCACCGCCGAATCCCAAGTACCCATTTTCCACTACCCCTCCAGCAACTCCAGATGGGTCTCCATTCTTTCCGACGTATCCTGGAACACCTCCTCCTCCGACGCCGGCGAGTTTCGCTTCGTTTCCGGCTAATATTTCTTCTTTGATTCTTCCTCATTCGTCGCAGTCTGGGTCCAGTTCCAAGAAGCTTGTTCCGTTGGCCATTGCTGCAGTTGTTTCTGCTGTTTTGGTTGTCTGCATTGCCGGGTTTTTGTACTGGCGGCGTCGGCGGCGCGGCCGTGGGTTGGCCGATGATAAGACGTTCAGATCCGAAAATAGTAGCCGGCTGTGTCCGGTTCCGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGACATCCTTCTGCTACGAGCTCTGAGTTTCTGTATTTGGGGACTCTTGTGAACTCGAGAGGGATCGACGATCGTTCCGTCGGGGGAGCTCGCGTGGCTGATCCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAATTTTGGTCGGTCGAGTGAGAAGCAGAATGGTGGAAATGGAGAGGAGAGATCAATTGCAGATGAAGAGGAAGAGGAATTTTACTCTCCGAAAGGTTCTCTCGGCGCAAATGGCTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCCACTTCCTATTCCACATCCAGCGGTTCCGTTTCGCCGGCGAGATCACGTTCTAAAAGTCTCTCTCTATCTCCGCCGGGGAGCTTGAGCCCTAGAAGATCCGTTCAGAATGAATCTTCCAATTTCTCTGTTTCTGCTGCTGCAGCGACAGAGCAGCATTCGCCTCCGTTAACGCCGCCACTTTCCCACGGCGGAGTGGAATCGGACAACGGCGGTAAATCCCATTGCCCTTCTCCCCTGCGTTTATCGACTGAGAAAGTTCCGGAGAAGAGCTCCACCGCATCTTCTTCCCGGAGATTTTCTAGTGTTTCAGTTCACAGTGCGATGTTCCCAATTTCAACAACCGATAAGGATTTGGATAATCATGACGATACGAACAATAATCACGAAGATTCTCCAAGACAATCACGTAATTCAGATCCAGAAGAACAGTTTCCTTCTTCTCCTTGTTTATCTCCACTTTCAGATGGAATTTTAGGGCAAATTCCGATTCAATTACCGACAGTTTCAAACGTTCCCGATTCAGATTCTGATGCAAAACTCAAGCAATTTTCTTACTCGTTTACTTCATCTTCACCTTCATCGTCGCCGGAGAGAGTGGTTTTGGACTCATCTCCGTCAAGAACTTCCATTATTTCAGATCAAAACAGGTCGTCTCCACCATCGCCGGAGAGAATTGTGATGAGTGATTCAGATTCATCAAAGAGAACTTTCGACCACTTAGATCAAGATTTTCAACCTTCTTCAGCTAACATCACTTCCACTGATGTGGGTCGACTGCAATCTCCTTCGGGAGCATCCGCCGCTCCTCCGCCACCGCCTCCGCCACCACCACCGCCACCACCACCGGCAGCACCCCTTCTGCCAGTACGTTGGGAAATTCCCATTTCCCCTTCTACACCAATGGACCAATCCATTCCAAGGGCACCTCCTCCATTAGTGCCTCCATTGAGGCCATTCATAATGGAGAATGTGAAAAATGTCTCACCAATTCAGTTGCCTTCCAGCAAAAGCAATGGTGAATCATCTGAAGAAACTCCCAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTAAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAGACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAGACAACTCCACGCCCTGTGCTTCCTACACCGAACCAAGAGATCGGAGTTCTTGATCCCAAAAAGTCGCAGAACATTGCGATTGCGCTGCGGGCACTTAATGTTACCATAGAAGAAGTTTGTGAAGCCCTTTTAGAAGGCAATGCGGATGCACTTGGAGCAGAGCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAACTAAAGGCATCCAAGGATTTCTCACCTACCAAGCTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATTGCAAATTTCGAGTCCGAGACTGAGTACTTAAAGAAGTCATTCGAAAATCTCGAGACCGCTTGCGAGGAATTGAGGAACAGCAGGATGTTCTTAAAACTTTTGGAAGCTGTGCTCAAGACTGGGAATCGCATGAACGTTGGCACCAACCGTGGCGATGCTCACGCCTTCAAACTCGACACACTTCTGAAGCTCGTCGATGTCAAGGGTGCAGATGGGAAAACCACTCTTCTGCACTTTGTCGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTAGCACAAGTCAAACTCCGAACTCCAACGTGAGCGACGATGTCAAATGCAGGAAACTCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCAGAGCTCGCCAACGTAAAGAAGGCAGCGTCAATGGATTCCGACGTGCTCAGCGGTGAGGTCATCAAGCTCTCCAGAGGACTCGACAACATCAGGGAGGTTCTACGTTTGAACGAAGCAGCAGACGGGCCAAACGAAAGCACAGAAAAGTTCTCAGAGTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGAGATCATCAGAATCCAAGCCCATGAAAGTGTTGCATTATCTCTGGTAAAGGAGATTACAGAGTACTTCCATGGAAACTCTGCCAAGGAAGAAGCTCATCCATTCAGAATTTTCATGGTGGTGAGAGATTTTCTAACGATCCTCGATGGAGTCTGCAAGGAAGTCGGGATGATAAACGAGCGAACAATCGTAAGTTCGGCACATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTCCAAGCTCATCATAGAGTGCAGAAATACAGTTCATCTGATGAAGAAAGTGAATCTCCATAG 3228 48.33 MFDSFFFFFILLVPCKSSEISAGGRRLLHQPFFPLDSVPPAEPPSPPVPPPPNPKYPFSTTPPATPDGSPFFPTYPGTPPPPTPASFASFPANISSLILPHSSQSGSSSKKLVPLAIAAVVSAVLVVCIAGFLYWRRRRRGRGLADDKTFRSENSSRLCPVPNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRGIDDRSVGGARVADPRPLDSPELHPLPPLNFGRSSEKQNGGNGEERSIADEEEEEFYSPKGSLGANGSGSRRVLATMAAEDLLGKTSDSSSTSYSTSSGSVSPARSRSKSLSLSPPGSLSPRRSVQNESSNFSVSAAAATEQHSPPLTPPLSHGGVESDNGGKSHCPSPLRLSTEKVPEKSSTASSSRRFSSVSVHSAMFPISTTDKDLDNHDDTNNNHEDSPRQSRNSDPEEQFPSSPCLSPLSDGILGQIPIQLPTVSNVPDSDSDAKLKQFSYSFTSSSPSSSPERVVLDSSPSRTSIISDQNRSSPPSPERIVMSDSDSSKRTFDHLDQDFQPSSANITSTDVGRLQSPSGASAAPPPPPPPPPPPPPPAAPLLPVRWEIPISPSTPMDQSIPRAPPPLVPPLRPFIMENVKNVSPIQLPSSKSNGESSEETPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVLPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCEALLEGNADALGAELLESLLKMAPTKEEERKLKASKDFSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYIANFESETEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCSTSQTPNSNVSDDVKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREVLRLNEAADGPNESTEKFSESMSRFLKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFQAHHRVQKYSSSDEESESP 1075
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41003786 41007776 + Lag0033115.1 Lac11g2477 588335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2477 1075 MobiDBLite consensus disorder prediction 526 545 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 470 511 - -
Lac11g2477 1075 PANTHER FORMIN-RELATED 400 1070 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lac11g2477 1075 Pfam Formin Homology 2 Domain 626 1022 IPR015425 -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 549 572 - -
Lac11g2477 1075 SUPERFAMILY Formin homology 2 domain (FH2 domain) 556 1033 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 470 572 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 277 340 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 277 441 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 368 394 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 197 262 - -
Lac11g2477 1075 Gene3D Formin, FH2 domain 621 1031 IPR042201 -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 613 634 - -
Lac11g2477 1075 ProSiteProfiles Formin homology-2 (FH2) domain profile. 624 1048 IPR015425 -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 39 77 - -
Lac11g2477 1075 MobiDBLite consensus disorder prediction 399 421 - -
Lac11g2477 1075 SMART it6_source 624 1037 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2477 Lac-Chr11:41003786 Lac9g1078 Lac-Chr9:25485814 1.90E-142 dispersed
Lac11g2477 Lac-Chr11:41003786 Lac13g1726 Lac-Chr13:19549443 4.20E-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2477 K28090 - csv:101211678 1611.28