Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2510 | ATGGGTGGTGGCCGCACTTTGTACACTTTGGCTGAGGTTGCCTCCCACGACAATCGCAACGACTGCTGGTTGATCATTGAGGACAAGGTGTACGATGTAACAAAATTCCTCGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACGATTCCTGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACCCCAGAATTCATTATCAAGGTCCTCCAGGTTCTTGCTCCCCTGGAGATGAGACTGAATAAACTTCCGAGCATGTTCGCTTCGCTTGCACACTTGCACCTGTTATTTGTCTTCCCCATCCTGAACCCGAAAACTGCTTTAGACTGTCGAAATTTAGATAGAGTGATTGCATAA | 483 | 47.0 | MGGGRTLYTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKVLQVLAPLEMRLNKLPSMFASLAHLHLLFVFPILNPKTALDCRNLDRVIA | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 41219714 | 41223030 | + | Lag0033148.1 | Lac11g2510 | 588368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2510 | 160 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 91 | IPR036400 | - | |
Lac11g2510 | 160 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Lac11g2510 | 160 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Lac11g2510 | 160 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Lac11g2510 | 160 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Lac11g2510 | 160 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Lac11g2510 | 160 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Lac11g2510 | 160 | FunFam | Cytochrome b5 type B | 4 | 85 | - | - | |
Lac11g2510 | 160 | Gene3D | - | 4 | 86 | IPR036400 | - | |
Lac11g2510 | 160 | PANTHER | CYTOCHROME B5 | 6 | 110 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Lac11g2510 | 160 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
Lac11g2510 | 160 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2510 | Lac-Chr11:41219714 | Lac4g0070 | Lac-Chr4:1259308 | 4.30E-38 | dispersed | |
Lac11g2510 | Lac-Chr11:41219714 | Lac12g2057 | Lac-Chr12:37681232 | 3.40E-43 | wgd | |
Lac11g2510 | Lac-Chr11:41219714 | Lac7g0465 | Lac-Chr7:3688907 | 1.20E-45 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2510 | K23490 | - | csv:101212882 | 228.794 |