Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2510 ATGGGTGGTGGCCGCACTTTGTACACTTTGGCTGAGGTTGCCTCCCACGACAATCGCAACGACTGCTGGTTGATCATTGAGGACAAGGTGTACGATGTAACAAAATTCCTCGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACGATTCCTGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACCCCAGAATTCATTATCAAGGTCCTCCAGGTTCTTGCTCCCCTGGAGATGAGACTGAATAAACTTCCGAGCATGTTCGCTTCGCTTGCACACTTGCACCTGTTATTTGTCTTCCCCATCCTGAACCCGAAAACTGCTTTAGACTGTCGAAATTTAGATAGAGTGATTGCATAA 483 47.0 MGGGRTLYTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKVLQVLAPLEMRLNKLPSMFASLAHLHLLFVFPILNPKTALDCRNLDRVIA 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 41219714 41223030 + Lag0033148.1 Lac11g2510 588368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2510 160 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 91 IPR036400 -
Lac11g2510 160 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Lac11g2510 160 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Lac11g2510 160 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lac11g2510 160 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Lac11g2510 160 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Lac11g2510 160 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Lac11g2510 160 FunFam Cytochrome b5 type B 4 85 - -
Lac11g2510 160 Gene3D - 4 86 IPR036400 -
Lac11g2510 160 PANTHER CYTOCHROME B5 6 110 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Lac11g2510 160 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Lac11g2510 160 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2510 Lac-Chr11:41219714 Lac4g0070 Lac-Chr4:1259308 4.30E-38 dispersed
Lac11g2510 Lac-Chr11:41219714 Lac12g2057 Lac-Chr12:37681232 3.40E-43 wgd
Lac11g2510 Lac-Chr11:41219714 Lac7g0465 Lac-Chr7:3688907 1.20E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2510 K23490 - csv:101212882 228.794