Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2617 | ATGGGAACGGATCAATTACAAGTACTAAATGCACTTGATGTAGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTGTTCTGCATATCTCTTGTCACCAAATTACTTGGAAGAATATACTATCATGTTGATGGCTCACCAAAGCCAGGGACATTGCCTCCAAATGTTGCTGCTGCTGTGAATGGTGTGGCTTTCTGTGGAACGCTAGCAGGGCAGCTCTTCTTTGGCTGGTTGGGCGACAAAATGGGGCGAAAGCGAGTTTACGGCATCACTCTAATGCTCATGGTCATATGCTCTATAGGCTCAGGCCTTTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTCTGCTTCTTTCGGTTCTGGCTTGGCTTCGGCATCGGTGGCGATTACCCTCTTTCGGCAACCATCATGTCGGAGTACTCGAATAAGAAGACTCGTGGTGCATTCATTGCTGCAGTGTTTGCTATGCAGGGGTTTGGAATTTTGGGTGGAGGCATATTTGCCATTATAGTCTCTGTGGCATTTGAGGCCAAGTATCATGCTCCACCTTATAAAGTTGATCCAGTTGCATCCACTGTGCCACAAGCAGATTACATTTGGAGGATCATTCTAATGGTTGGAGCTCTTCCAGCTGCTCTTACTTACTATTGGAGGATGAAGATGCCCGAAACCGCACGGTACACGGCTCTTGTAGCGAAAGATACGACTCAAGCTGCATCAGATATGTCAAAAGTTTTGCAGATGGATATTGAGGCAGAGCCACAAAAGCCTGCTCAGCAGCAGATGCCAGATGCAAGTGCAAGTGCAAGTGCATATGGTCTATTCTCTAGAGAGTTTTTTCGTCGCCATGGAACTCACTTACTTGGAACTACAAGTACTTGGTTTTTACTTGACGTTGCATTCTACAGTCAGAATTTGTTTCAAAAAGATATCTTCAGTGCTATTGGATGGATTCCTCCAGCAGCTACCATGAATGCAATTCAAGAAGTTTTCAGAATAGCAAGGGCTCAAACACTCATTGCACTCTGCAGTACTGTCCCTGGCTACTGGTTCACCGTGGCTTTCATTGACAAGATAGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCATACCATCATTGGACTCTAAAGGACAACCGTATTGGCTTCGTTGTCCTCTACTCGTTAACATTCTTCTTTGCGAATTTCGGACCGAATGCAACCACTTTCGTTGTCCCAGCTGAAATCTTTCCAGCACGGTTCCGTTCTACTTGCCACGGTATATCATCAGCATCTGGCAAGCTTGGAGCTATGGTGGGTGCATTCGGTTTTCTATACTTGGCTCAGAACCAGGACAAGAACAAAACTGATGCAGGATATCCTCCTGGCATTGGAGTTAAGAACTCACTTTTGTTGTTGGGTGGACTCAACTTCTTGGGGATTCTGTTTACTTTTCTCGTGCCTGAAGCGAAGGGAAAATCGTTGGAAGAGATGTCGGGCGAGAACGAAGATGGAACTACTAGAGAGTTGGGAGACCAGACCCCTACTGGTGGTAGAACAGCCTCACAGGTTTGA | 1635 | 45.44 | MGTDQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGITLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSVAFEAKYHAPPYKVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMDIEAEPQKPAQQQMPDASASASAYGLFSREFFRRHGTHLLGTTSTWFLLDVAFYSQNLFQKDIFSAIGWIPPAATMNAIQEVFRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTTRELGDQTPTGGRTASQV | 544 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 42174581 | 42176215 | - | Lag0033255.1 | Lac11g2617 | 588475 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2617 | 544 | MobiDBLite | consensus disorder prediction | 515 | 544 | - | - | |
Lac11g2617 | 544 | FunFam | Inorganic phosphate transporter 1-6 | 20 | 532 | - | - | |
Lac11g2617 | 544 | SUPERFAMILY | MFS general substrate transporter | 12 | 519 | IPR036259 | - | |
Lac11g2617 | 544 | Gene3D | MFS general substrate transporter like domains | 20 | 536 | IPR036259 | - | |
Lac11g2617 | 544 | Pfam | Sugar (and other) transporter | 26 | 519 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lac11g2617 | 544 | CDD | MFS_PhT | 25 | 511 | - | - | |
Lac11g2617 | 544 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 517 | - | - | |
Lac11g2617 | 544 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 512 | IPR020846 | GO:0022857(InterPro) | |
Lac11g2617 | 544 | NCBIfam | phosphate:H+ symporter | 11 | 521 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Lac11g2617 | 544 | MobiDBLite | consensus disorder prediction | 529 | 544 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2617 | Lac-Chr11:42174581 | Lac7g0591 | Lac-Chr7:4729829 | 6.40E-235 | dispersed | |
Lac11g2617 | Lac-Chr11:42174581 | Lac11g2618 | Lac-Chr11:42181563 | 1.60E-294 | tandem | |
Lac2g0057 | Lac-Chr2:428824 | Lac11g2617 | Lac-Chr11:42174581 | 3.40E-148 | transposed | |
Lac8g1869 | Lac-Chr8:36966795 | Lac11g2617 | Lac-Chr11:42174581 | 1.10E-234 | transposed | |
Lac11g2617 | Lac-Chr11:42174581 | Lac12g2174 | Lac-Chr12:38827933 | 1.90E-239 | wgd | |
Lac11g2617 | Lac-Chr11:42174581 | Lac7g0590 | Lac-Chr7:4710468 | 2.30E-237 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2617 | K08176 | - | gmx:100819445 | 904.434 |