Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2617 ATGGGAACGGATCAATTACAAGTACTAAATGCACTTGATGTAGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTGTTCTGCATATCTCTTGTCACCAAATTACTTGGAAGAATATACTATCATGTTGATGGCTCACCAAAGCCAGGGACATTGCCTCCAAATGTTGCTGCTGCTGTGAATGGTGTGGCTTTCTGTGGAACGCTAGCAGGGCAGCTCTTCTTTGGCTGGTTGGGCGACAAAATGGGGCGAAAGCGAGTTTACGGCATCACTCTAATGCTCATGGTCATATGCTCTATAGGCTCAGGCCTTTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTCTGCTTCTTTCGGTTCTGGCTTGGCTTCGGCATCGGTGGCGATTACCCTCTTTCGGCAACCATCATGTCGGAGTACTCGAATAAGAAGACTCGTGGTGCATTCATTGCTGCAGTGTTTGCTATGCAGGGGTTTGGAATTTTGGGTGGAGGCATATTTGCCATTATAGTCTCTGTGGCATTTGAGGCCAAGTATCATGCTCCACCTTATAAAGTTGATCCAGTTGCATCCACTGTGCCACAAGCAGATTACATTTGGAGGATCATTCTAATGGTTGGAGCTCTTCCAGCTGCTCTTACTTACTATTGGAGGATGAAGATGCCCGAAACCGCACGGTACACGGCTCTTGTAGCGAAAGATACGACTCAAGCTGCATCAGATATGTCAAAAGTTTTGCAGATGGATATTGAGGCAGAGCCACAAAAGCCTGCTCAGCAGCAGATGCCAGATGCAAGTGCAAGTGCAAGTGCATATGGTCTATTCTCTAGAGAGTTTTTTCGTCGCCATGGAACTCACTTACTTGGAACTACAAGTACTTGGTTTTTACTTGACGTTGCATTCTACAGTCAGAATTTGTTTCAAAAAGATATCTTCAGTGCTATTGGATGGATTCCTCCAGCAGCTACCATGAATGCAATTCAAGAAGTTTTCAGAATAGCAAGGGCTCAAACACTCATTGCACTCTGCAGTACTGTCCCTGGCTACTGGTTCACCGTGGCTTTCATTGACAAGATAGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCATACCATCATTGGACTCTAAAGGACAACCGTATTGGCTTCGTTGTCCTCTACTCGTTAACATTCTTCTTTGCGAATTTCGGACCGAATGCAACCACTTTCGTTGTCCCAGCTGAAATCTTTCCAGCACGGTTCCGTTCTACTTGCCACGGTATATCATCAGCATCTGGCAAGCTTGGAGCTATGGTGGGTGCATTCGGTTTTCTATACTTGGCTCAGAACCAGGACAAGAACAAAACTGATGCAGGATATCCTCCTGGCATTGGAGTTAAGAACTCACTTTTGTTGTTGGGTGGACTCAACTTCTTGGGGATTCTGTTTACTTTTCTCGTGCCTGAAGCGAAGGGAAAATCGTTGGAAGAGATGTCGGGCGAGAACGAAGATGGAACTACTAGAGAGTTGGGAGACCAGACCCCTACTGGTGGTAGAACAGCCTCACAGGTTTGA 1635 45.44 MGTDQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGITLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIVSVAFEAKYHAPPYKVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMDIEAEPQKPAQQQMPDASASASAYGLFSREFFRRHGTHLLGTTSTWFLLDVAFYSQNLFQKDIFSAIGWIPPAATMNAIQEVFRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTTRELGDQTPTGGRTASQV 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42174581 42176215 - Lag0033255.1 Lac11g2617 588475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2617 544 MobiDBLite consensus disorder prediction 515 544 - -
Lac11g2617 544 FunFam Inorganic phosphate transporter 1-6 20 532 - -
Lac11g2617 544 SUPERFAMILY MFS general substrate transporter 12 519 IPR036259 -
Lac11g2617 544 Gene3D MFS general substrate transporter like domains 20 536 IPR036259 -
Lac11g2617 544 Pfam Sugar (and other) transporter 26 519 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac11g2617 544 CDD MFS_PhT 25 511 - -
Lac11g2617 544 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 517 - -
Lac11g2617 544 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 512 IPR020846 GO:0022857(InterPro)
Lac11g2617 544 NCBIfam phosphate:H+ symporter 11 521 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Lac11g2617 544 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2617 Lac-Chr11:42174581 Lac7g0591 Lac-Chr7:4729829 6.40E-235 dispersed
Lac11g2617 Lac-Chr11:42174581 Lac11g2618 Lac-Chr11:42181563 1.60E-294 tandem
Lac2g0057 Lac-Chr2:428824 Lac11g2617 Lac-Chr11:42174581 3.40E-148 transposed
Lac8g1869 Lac-Chr8:36966795 Lac11g2617 Lac-Chr11:42174581 1.10E-234 transposed
Lac11g2617 Lac-Chr11:42174581 Lac12g2174 Lac-Chr12:38827933 1.90E-239 wgd
Lac11g2617 Lac-Chr11:42174581 Lac7g0590 Lac-Chr7:4710468 2.30E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2617 K08176 - gmx:100819445 904.434