Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2618 | ATGGGAAAGGAGCCATTACAAGTACTGAATGCACTTGATGTAGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTGTTCTGCATATCTCTTGTCACCAAATTACTTGGAAGAATATACTATCATGTTGATGGCTCACCAAAGCCTGGGACACTGCCTCCAAATGTTGCTGCTGCTGTGAATGGTGTGGCGTTCTGCGGAACGCTAGCAGGGCAACTCTTCTTTGGCTGGTTGGGCGACAAAATGGGGCGAAAGCGAGTTTATGGCATGACTCTAATGCTCATGGTTATATGCTCTATAGGCTCAGGCCTGTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTCTGCTTCTTTCGGTTCTGGCTTGGCTTTGGCATTGGTGGTGATTACCCTCTTTCGGCAACCATCATGTCGGAGTACTCGAATAAGAAGACTCGTGGTGCATTCATTGCTGCTGTGTTTGCCATGCAGGGGTTTGGAATTTTGGGTGGAGGCATATTTGCCATTTTCATATCTCTGGCATTTAAGGCCAAGTTTGATGCTCCACCTTATGCAGTTGATCCAGTTGCCTCCACTGTGCCCCAAGCAGATTACATTTGGAGGATCATTCTAATGGTTGGAGCTCTTCCAGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCTGAAACTGCACGGTATACGGCTCTCGTAGCCAAAAATACAACTCAAGCTGCATCAGACATGTCAAAAGTTCTGCACATGGATATTGAGGCAGAAACACAGCAGCCGACTCAGCAGATACCAAAAGCAAATGCAAATGCATATGGCTTGTTCTCGAAAGAGTTTCTTCGTCGCCATGGAACTCACTTACTTGGAACTACAAGTACTTGGTTTTTACTTGACATTGCATTCTATAGCCAGAACTTGTTTCAGAAAGATATCTTCAGCGCAATTGGATGGATCCCTCCAGCAGCCACCATGAATGCAATTGAAGAAGTTTTCAGAATCGCAAGGGCTCAAACACTCATTGCCCTCTGCAGTACTGTCCCTGGCTACTGGTTCACCGTGGCTTTCATTGACAAGATGGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCATACCATCACTGGACTCTAAAGGACAACCGTATTGGCTTCGTCGTCCTCTACTCGTTAACGTTTTTCTTTGCGAATTTCGGACCGAATGCAACCACTTTCGTTGTCCCAGCTGAAATCTTTCCAGCAAGATTCCGTGCTACTTGCCACGGTATATCATCAGCATCTGGAAAGCTTGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAACCAGGAGAAGAACAAAACTGATGCAGGATATCCTCCTGGCATTGGAGTCAAGAACTCACTTCTGTTGTTGGGTGGACTCAACTTCTTGGGGATTCTGTTTACTTTTCTCGTGCCTGAAGCGAAGGGGAAATCGTTGGAAGAGATGTCGGGCGAGAACGAAGATGGAACCATGGGAGAAAAGGGGAGGCAAACATCTAGCCATGGAACAGTTTCAGATGTTTAA | 1623 | 45.47 | MGKEPLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIFISLAFKAKFDAPPYAVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKNTTQAASDMSKVLHMDIEAETQQPTQQIPKANANAYGLFSKEFLRRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRATCHGISSASGKLGAMVGAFGFLYLAQNQEKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTMGEKGRQTSSHGTVSDV | 540 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 42181563 | 42183185 | - | Lag0033256.1 | Lac11g2618 | 588476 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2618 | 540 | MobiDBLite | consensus disorder prediction | 513 | 540 | - | - | |
Lac11g2618 | 540 | Pfam | Sugar (and other) transporter | 26 | 516 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lac11g2618 | 540 | CDD | MFS_PhT | 25 | 508 | - | - | |
Lac11g2618 | 540 | NCBIfam | phosphate:H+ symporter | 11 | 518 | IPR004738 | GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro) | |
Lac11g2618 | 540 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 9 | 514 | - | - | |
Lac11g2618 | 540 | MobiDBLite | consensus disorder prediction | 513 | 527 | - | - | |
Lac11g2618 | 540 | SUPERFAMILY | MFS general substrate transporter | 11 | 516 | IPR036259 | - | |
Lac11g2618 | 540 | Gene3D | MFS general substrate transporter like domains | 20 | 532 | IPR036259 | - | |
Lac11g2618 | 540 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 509 | IPR020846 | GO:0022857(InterPro) | |
Lac11g2618 | 540 | FunFam | Inorganic phosphate transporter 1-6 | 20 | 530 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2618 | Lac-Chr11:42181563 | Lac12g2174 | Lac-Chr12:38827933 | 1.10E-239 | dispersed | |
Lac11g2617 | Lac-Chr11:42174581 | Lac11g2618 | Lac-Chr11:42181563 | 1.60E-294 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2618 | K08176 | - | gmx:100819445 | 902.123 |