Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac11g2618 ATGGGAAAGGAGCCATTACAAGTACTGAATGCACTTGATGTAGCCAAAACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTGTTCTGCATATCTCTTGTCACCAAATTACTTGGAAGAATATACTATCATGTTGATGGCTCACCAAAGCCTGGGACACTGCCTCCAAATGTTGCTGCTGCTGTGAATGGTGTGGCGTTCTGCGGAACGCTAGCAGGGCAACTCTTCTTTGGCTGGTTGGGCGACAAAATGGGGCGAAAGCGAGTTTATGGCATGACTCTAATGCTCATGGTTATATGCTCTATAGGCTCAGGCCTGTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTCTGCTTCTTTCGGTTCTGGCTTGGCTTTGGCATTGGTGGTGATTACCCTCTTTCGGCAACCATCATGTCGGAGTACTCGAATAAGAAGACTCGTGGTGCATTCATTGCTGCTGTGTTTGCCATGCAGGGGTTTGGAATTTTGGGTGGAGGCATATTTGCCATTTTCATATCTCTGGCATTTAAGGCCAAGTTTGATGCTCCACCTTATGCAGTTGATCCAGTTGCCTCCACTGTGCCCCAAGCAGATTACATTTGGAGGATCATTCTAATGGTTGGAGCTCTTCCAGCTGCTCTTACTTACTACTGGAGGATGAAAATGCCTGAAACTGCACGGTATACGGCTCTCGTAGCCAAAAATACAACTCAAGCTGCATCAGACATGTCAAAAGTTCTGCACATGGATATTGAGGCAGAAACACAGCAGCCGACTCAGCAGATACCAAAAGCAAATGCAAATGCATATGGCTTGTTCTCGAAAGAGTTTCTTCGTCGCCATGGAACTCACTTACTTGGAACTACAAGTACTTGGTTTTTACTTGACATTGCATTCTATAGCCAGAACTTGTTTCAGAAAGATATCTTCAGCGCAATTGGATGGATCCCTCCAGCAGCCACCATGAATGCAATTGAAGAAGTTTTCAGAATCGCAAGGGCTCAAACACTCATTGCCCTCTGCAGTACTGTCCCTGGCTACTGGTTCACCGTGGCTTTCATTGACAAGATGGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCATACCATCACTGGACTCTAAAGGACAACCGTATTGGCTTCGTCGTCCTCTACTCGTTAACGTTTTTCTTTGCGAATTTCGGACCGAATGCAACCACTTTCGTTGTCCCAGCTGAAATCTTTCCAGCAAGATTCCGTGCTACTTGCCACGGTATATCATCAGCATCTGGAAAGCTTGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAACCAGGAGAAGAACAAAACTGATGCAGGATATCCTCCTGGCATTGGAGTCAAGAACTCACTTCTGTTGTTGGGTGGACTCAACTTCTTGGGGATTCTGTTTACTTTTCTCGTGCCTGAAGCGAAGGGGAAATCGTTGGAAGAGATGTCGGGCGAGAACGAAGATGGAACCATGGGAGAAAAGGGGAGGCAAACATCTAGCCATGGAACAGTTTCAGATGTTTAA 1623 45.47 MGKEPLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGSPKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIFISLAFKAKFDAPPYAVDPVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVAKNTTQAASDMSKVLHMDIEAETQQPTQQIPKANANAYGLFSKEFLRRHGTHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRATCHGISSASGKLGAMVGAFGFLYLAQNQEKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTMGEKGRQTSSHGTVSDV 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42181563 42183185 - Lag0033256.1 Lac11g2618 588476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac11g2618 540 MobiDBLite consensus disorder prediction 513 540 - -
Lac11g2618 540 Pfam Sugar (and other) transporter 26 516 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac11g2618 540 CDD MFS_PhT 25 508 - -
Lac11g2618 540 NCBIfam phosphate:H+ symporter 11 518 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Lac11g2618 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 514 - -
Lac11g2618 540 MobiDBLite consensus disorder prediction 513 527 - -
Lac11g2618 540 SUPERFAMILY MFS general substrate transporter 11 516 IPR036259 -
Lac11g2618 540 Gene3D MFS general substrate transporter like domains 20 532 IPR036259 -
Lac11g2618 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857(InterPro)
Lac11g2618 540 FunFam Inorganic phosphate transporter 1-6 20 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2618 Lac-Chr11:42181563 Lac12g2174 Lac-Chr12:38827933 1.10E-239 dispersed
Lac11g2617 Lac-Chr11:42174581 Lac11g2618 Lac-Chr11:42181563 1.60E-294 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac11g2618 K08176 - gmx:100819445 902.123