Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2645 | ATGGAAGAGGTTGAAGAAGCTAACAGAGCTGCCATAGAGACCTGCCATGGAGTTTTGAATCTCTTGGCAGCTCATCATCAACATCAACCCCTTCAAGACCAAGTTCAGTTGAGCAACTTAATGGTGGAAACTGGAGAAGCAGTTTTCAAGTTCAGAAAAGTGCTTTCTCTTTTGAATTCTGGCTTTGGTCATGCAAGAGTTAGAAGGTTTAACAAGATTCCTCCTCCTCCTCTCCCCAATTTGCCCCAAAAGGCCCTCTTGGATTGCCCAATTTACAGGCCAGATCCTCCAAGCAAAAATCTTCACCCTTTTCACCCTGGTTTCAATGGTAAAGTTTCAATTTTTATGGGTAACCCAGATTTGGAATTGGGTCAAAATGACAAAAACTCCCTCCAAATTCCCAAACAAGCAGCTCCATCTTTAAACTTCAGCTTCCCTCAACAACAACAGCAGCACCAACAGAGGCTGTTGGCTCATCAGAAACAGATGAAACAGCAAGCTGAAATGATGTTTCTTAGGAGCAACAGTGGGATGAATAATCTGAATTTTGACAGCTCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCCTCGTTGAGTATGGACGGTAGCGTCGCCGACGGGAGCTCGTTCCATTTGATCGGACCGTCATCGACGTCGGCCGATAACAAGAGGAAGTTCCCTGGGAGGGGAGATGAAGGGAGCTTGAAATGTGGAAGCACTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAAGTGCCTGCTATTAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGGCAAAAGCCAATTAAGGGTTCTCCTCATCCGAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCAGCGAGAAAGCATGTCGAGCGGTGCCTAGAAGACCCGTCGATGCTTATTGTAACGTACGAAGGCGAACACAATCACCCGAAAATGTCGACACAATCTGCACACACTTAG | 1029 | 44.9 | MEEVEEANRAAIETCHGVLNLLAAHHQHQPLQDQVQLSNLMVETGEAVFKFRKVLSLLNSGFGHARVRRFNKIPPPPLPNLPQKALLDCPIYRPDPPSKNLHPFHPGFNGKVSIFMGNPDLELGQNDKNSLQIPKQAAPSLNFSFPQQQQQHQQRLLAHQKQMKQQAEMMFLRSNSGMNNLNFDSSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTSADNKRKFPGRGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 42453274 | 42455102 | - | Lag0033283.1 | Lac11g2645 | 588503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2645 | 342 | Pfam | Plant zinc cluster domain | 236 | 272 | IPR018872 | - | |
Lac11g2645 | 342 | ProSiteProfiles | WRKY domain profile. | 269 | 335 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g2645 | 342 | SMART | WRKY_cls | 274 | 334 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g2645 | 342 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 338 | IPR044810 | GO:0003700(InterPro) | |
Lac11g2645 | 342 | Gene3D | WRKY domain | 258 | 334 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g2645 | 342 | Pfam | WRKY DNA -binding domain | 276 | 333 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Lac11g2645 | 342 | FunFam | WRKY transcription factor 65 | 258 | 335 | - | - | |
Lac11g2645 | 342 | SUPERFAMILY | WRKY DNA-binding domain | 272 | 334 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2645 | Lac-Chr11:42453274 | Lac2g0348 | Lac-Chr2:2618629 | 4.80E-47 | dispersed | |
Lac11g2645 | Lac-Chr11:42453274 | Lac4g2208 | Lac-Chr4:41754574 | 1.80E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22993 | PF03106 | WRKY | 1.20E-26 | CL0274 | Lac | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2645 | - | - | - | 0.0 |