Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac11g2666 | ATGGCTTTCCAGAAGATCGAAGTAACCCAATTCTATACGATTATTCTATGGTTTATGGTGGACACGATAACCTACTGCTTTGCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGTGCTCCGGCAGTATTTCAATCCCCGAAATGCCCTCTCTGGAAGCTCTCCGACTACACCTTTCAATCTCCCAGCGCTCCTCATTGCCAAATTGCAATGCATCAGGGTCGAAGAAAGTACCAGGAGGATCGCACCCTTTGTGCTCTCGACGTTCGAATTCCCTTCCTAAGTAAAACAGGTCTTACGGAGGTTCCTGTGGGAATTGTAGCAGTTTTTGATGGTCATAATGGAGCTGAAGCTAGTGAGATGGCTTCTAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTCGATGCCACTTATTCTGGAGTTTTCAAGAGATCCATAAAGACATTTTCAAATGAGAGGGAACATGGTACCATCTTTAATCAGCTTAGTTGGAATGAAGAAATTAGTAACCGTGATCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGTAGATTTTGATGATGATTTTCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAAGAAGCACATAAAAATAATCTCGTTTCGGGTTCTACTGCTACCATTATATTATTAGCAGATGCACAAATTTTGGTTGCAAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCACCTCACATGCAAGGGGCTATGGAAATTCTAGACCAGACTCATTTGATGGGCTGACACATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGCCATGTTGTTGATTGGGGTGGTGTACCTCGAGTAAATGGTCAGTTGGCTATAACTAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGTCTACCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCTCACAAGACGTTTGTGACTTGTTGTGGGAAATACACAATGATGGTATGTCGAGTTCTGAACATTCTCCTTCATGCTCATACTCATTGGCAGATTGCATTGTTAGCACTGCCTTTGAAAGGGGCAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTATTTCTTCTCGGAGGTTTCAGGAGGGAAGCTTTTTTGCACAGAGAGACTCACGTTTTCCCATATCTGGGATAGACAAGCTCATTAAAGAGCACTCAGCCAAGGGCGTCTCTTCCAATGCTGTGCAATTGGAACATTCTCATCCAGTTGTGTCCAAGTTCAAGAGATTATTAGTTGAAGGAAGATACAATAATCCGGGATGTTTTTATCTATCTGAGAATCTGGATGAATACAAGGATTATGTGTTGAGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAATCCCTCAATCAGCCATATGGTGGATCTTTAAATGTGTACAATGACCAAAGCATGTGCTTTCATCTTGGAATGATTGGAGCTAAAGATCAATGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGTTTGCTTGAATCAATTCCTTTCCACGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATGTGTTAAAGAAAAGGTTTGGTCGGGGTTCCTATGGTGAAGTATGGCTGGCTTTTCATGGAAACTGCCAGGAAGCCTTTAGTCCAGTAGGAGAGAATATTAATGATTCGTGCAACTCATCTTCTGAAGACGCCAATGTCAGAAACTGTGGTTACTCTTCAAATAGTTCTCAATCCTATTCTCTGGAGGATAACTTGTTCATCATGAAACGTGTAATGGTTGAAAGGGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAAAAATATTTTGGTGAAATATTCTTGAATGCTTCTTCACGCCTTGGAGATGTGTTATCTACTGGAAGATCAAACTTTGTCTTTGAAGAGTCACCGTGGGGATCTAAAGACTTACTGGCAAAGGATGAATCACAGAGTTATAAAGTATGGGAAACTAGGCATTTTAAAAATACTTTTTCAAATCAGTTTAGACCAAAGGGAGTTATCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGCATGTCCCTCTCAAAGCTCATATATTCTATTGAAGATGCTGATGAAGAAAAAGTTGAACAAAGAAACCACGTTCAAATTTTGCGACCTTCTAAGTGGTGGCATTGGTTGAAAACAACAGAAGCAGGACAAGAGGAAATGAAAAATTTGATACGTCAGTTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCATAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCGAAGGGGAGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTTAAACATCTATATGGGTCTACTGGGCCCTCCAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAACTCAAGTTGGTACCAGGAGATATCAAGTGCAACTTTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAGCATCTTCAAGGTTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGAGTTCCTCAAAAAGTTACCAAAAAAATGTTCATCAAGGAGGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTACGGTTGGTCCGCAGTCTACTACAATGGAATCCAGAGGACCGTTTGGATGTCGATGATGCTTTGCGACACCCTTATTTCCACCCTTCTCCAAAAGGAAGATGA | 3276 | 40.6 | MAFQKIEVTQFYTIILWFMVDTITYCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQSPSAPHCQIAMHQGRRKYQEDRTLCALDVRIPFLSKTGLTEVPVGIVAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGVFKRSIKTFSNEREHGTIFNQLSWNEEISNRDLELGRLKYLLPVDFDDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATIILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGTSHARGYGNSRPDSFDGLTHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSTNDSYLVASSDGIFEKLSSQDVCDLLWEIHNDGMSSSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPAISSRRFQEGSFFAQRDSRFPISGIDKLIKEHSAKGVSSNAVQLEHSHPVVSKFKRLLVEGRYNNPGCFYLSENLDEYKDYVLRTQNEEEEYLCDLPHALPESLNQPYGGSLNVYNDQSMCFHLGMIGAKDQCFNPEGFASFIGLLESIPFHDPGPDYQLFEHSPPVLRYVLKKRFGRGSYGEVWLAFHGNCQEAFSPVGENINDSCNSSSEDANVRNCGYSSNSSQSYSLEDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASSRLGDVLSTGRSNFVFEESPWGSKDLLAKDESQSYKVWETRHFKNTFSNQFRPKGVIYEEGLNHIVRYVESFESRSNEIWLVFHYEGMSLSKLIYSIEDADEEKVEQRNHVQILRPSKWWHWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSRRGDENFSTKMRIIDFGSAIDEFTVKHLYGSTGPSRAEQTYDYTPPEALLNSSWYQEISSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKQLAYKLRSFMELCILIPGSSSKSYQKNVHQGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRSLLQWNPEDRLDVDDALRHPYFHPSPKGR | 1091 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 42623504 | 42647604 | + | Lag0033304.1 | Lac11g2666 | 588524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac11g2666 | 1091 | Gene3D | Transferase(Phosphotransferase) domain 1 | 823 | 1085 | - | - | |
Lac11g2666 | 1091 | Gene3D | - | 60 | 445 | IPR036457 | - | |
Lac11g2666 | 1091 | SUPERFAMILY | Protein kinase-like (PK-like) | 770 | 1086 | IPR011009 | - | |
Lac11g2666 | 1091 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 861 | 873 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac11g2666 | 1091 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 440 | IPR001932 | - | |
Lac11g2666 | 1091 | Pfam | Protein kinase domain | 772 | 1084 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g2666 | 1091 | SMART | serkin_6 | 612 | 1084 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g2666 | 1091 | Pfam | Protein phosphatase 2C | 201 | 256 | IPR001932 | - | |
Lac11g2666 | 1091 | Pfam | Protein phosphatase 2C | 303 | 433 | IPR001932 | - | |
Lac11g2666 | 1091 | SMART | PP2C_4 | 60 | 438 | IPR001932 | - | |
Lac11g2666 | 1091 | CDD | PP2Cc | 75 | 440 | IPR001932 | - | |
Lac11g2666 | 1091 | PANTHER | PROTEIN PHOSPHATASE | 69 | 439 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Lac11g2666 | 1091 | ProSiteProfiles | Protein kinase domain profile. | 612 | 1084 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac11g2666 | 1091 | SUPERFAMILY | PP2C-like | 66 | 441 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2666 | Lac-Chr11:42623504 | Lac1g3597 | Lac-Chr1:55182928 | 6.30E-16 | dispersed | |
Lac11g2666 | Lac-Chr11:42623504 | Lac2g0725 | Lac-Chr2:5585682 | 1.50E-09 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85772 | PF00069 | Pkinase | 2.80E-26 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac11g2666 | - | - | - | 0.0 |