Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0029 ATGGCGACGGCGGTTGTGATCGGCGGCGGGGGCGGGGGCGGGGGCGGAGGCTCATCGAAGTCGAGGAGAAAGCAAATTTGGTACTCTCATCAGCCTCTGGCTCCGCTGATGGAAGGGCCCGGACCCGACCCGCAGTTCCAAGACCAAGAACCCAACAAGAAAGACTCCTCCGCTTCCAACTGGGAATTCTTCCGCGACTGGTTCAAGATCCACCGCAACAACCTCCCGCCCTCTCTCCCCGCCGCCGCCCCATCCTCCTCCTCCTCCTCCTTTACCAATGACTTGAAGCTCTTGCTCGGCGTCCTCGCCTGCCCACTCGCTCCCATTCCCCTCTCTCCCGCTCCGCTTCACCTCCATTCCCCTCCTTATACTTCCCACTTTCCACACGATACCCCACTTGAAACCTCCGTGGCTCATTACATTATACAGCAATACTTGGCTGCCACCGGATGTCTCAAACAGCAAAAGTCTCCCAAGAACATGTATGCCACGGGAAGCCTCAAGATGATTCGCTGCGAAACAGAGGTTTCTTCGGGCAAGGCTGTGAAGACCGTAGGCACAAGAATCGAGGACACCGGCTGCTTTGTTCTTTGGCAGATGCTGCCGGCCATGTGGTCCCTCGAATTGGTGGTCGGAGGCAGTAAGGTGGTCGCCGGCAGCGACGGCAAGACCGTCTGGCGTCACACTCCCTGGCTCGGCACCCATGCCGCCAAAGGCCCCCAACGACCTCTCCGTCGCATCATTCAGGGTCTAGACCCAAAGAGCACAGCGAGGCTGTTCGAGAAAGCCCAATGCCTGGGGGAAAAGCGGATCGGGGAAGACGAGTGCTTCGTGCTGAAAGTATCGGCAGAGCGGGAGGCAGTGATGGAGAGGAACGAGGGGCCTGCGGAAGTGATAAGGCACGTGCTGTACGGATACTTCTGCCAGAAGAGCGGAGTGCTTGTGTACCTAGAGGACTCTCACCTGACCAGGGTCCAGACCGAAGGCGACGCCGTCTACTGGGAAACCACCATCGGGAGCTGCATCGGAGACTACAGGGACGTGGACGGCGTCCTCATCGCCCATCGGGGCAGGTCCATAGCCACCGTGTTCAAGTTTGGGGAAATGTCGAGCCAATTTAGCAGGACCCGGATGGAAGAGGTCTGGAGCATTGACGATGTGATGTTCAACGTTGCTGGCCTTAGCATCGACTACTTTATTCCTCCCGCTGATATTTTTGATACTCTTCATTCTCATTCTCATTCTCATCCTCATCCTCATTCTCCATGA 1269 57.45 MATAVVIGGGGGGGGGGSSKSRRKQIWYSHQPLAPLMEGPGPDPQFQDQEPNKKDSSASNWEFFRDWFKIHRNNLPPSLPAAAPSSSSSSFTNDLKLLLGVLACPLAPIPLSPAPLHLHSPPYTSHFPHDTPLETSVAHYIIQQYLAATGCLKQQKSPKNMYATGSLKMIRCETEVSSGKAVKTVGTRIEDTGCFVLWQMLPAMWSLELVVGGSKVVAGSDGKTVWRHTPWLGTHAAKGPQRPLRRIIQGLDPKSTARLFEKAQCLGEKRIGEDECFVLKVSAEREAVMERNEGPAEVIRHVLYGYFCQKSGVLVYLEDSHLTRVQTEGDAVYWETTIGSCIGDYRDVDGVLIAHRGRSIATVFKFGEMSSQFSRTRMEEVWSIDDVMFNVAGLSIDYFIPPADIFDTLHSHSHSHPHPHSP 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 442075 444575 + Lag0014401.1 Lac12g0029 588626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0029 422 PANTHER LIPASE 29 405 IPR006873 -
Lac12g0029 422 MobiDBLite consensus disorder prediction 1 57 - -
Lac12g0029 422 Pfam Protein of unknown function (DUF620) 161 402 IPR006873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2681 Lac-Chr10:41055777 Lac12g0029 Lac-Chr12:442075 6.40E-34 dispersed
Lac12g0029 Lac-Chr12:442075 Lac6g0262 Lac-Chr6:2119745 1.60E-100 dispersed
Lac12g0029 Lac-Chr12:442075 Lac5g2587 Lac-Chr5:44365729 1.20E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0029 - - - 0.0