Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0035 ATGGAGGACGGTTTCGCAGCTGAGAGGCTCTTCAACCAGGGATTTTCCTACACCTACGACGATGTCATCTTCCTTCCTCACTACATTGACTTCCCCACCGATTCCGTCCAACTCGCTACTCGACTCACCCGCAATATCTCCCTCTCTATCCCCTGCGTCTCTTCCCCCATGGACACCGTCACCGAAGCCTACATGGCCTCCGCCATGGCTGCTCTTGGTGGCATCGGCATCATCCACTCCAATTCCCCCGCCTCCCAACAAGCTGCCATGGTTCACGCCGCCAAGGCCCGCCGAGTTCCTATTTTGTCAAATCCTGTTTTCAAGTCTCCATCCGATCGGATTGACTCTGAAGAAGATTTTGCTTCTTCGCCCTTCGTCTTGGTTACAGAGGCGGGTACCGCAAAGTCGAAGCTTCTGGGCTATGTCTCGTACGCGGATTGGACCTCCCAGGAGAACAAAGAAGTGAAAATATATGATTATATGGTGAATTCGGGGGCTTCAGTTCCGTGGAACTATGATTTAGCGCAAGTGGACGCGTGTTTGGAGGAAAAGAAGTCGGACTTTGTGACGCTGTTGAAGGACGACGAAGTTGTAGATGTTGTGACGAAGTCTCAAGTAGAAAGAATCAAGAGCTATCCAAAACTGGGCGTTGGCTCGGTTGCGGCCGATGGTTCTTGGCTGGTAGGGGCTTCGATTGGAACGAGGGAACATGACAAGGAGAGGCTGAAGCTTTTGGTGCAAGCAGGTGTAAATGTAGTAGTATTAGATAGTTCACAGGGTAACTCCAGTTATCAGATTGATATGATAAAGTATGTGAAGCGGACATATCCTGAGTTGGACGTGATTGGCGGGAATGTGGTCACGATGGCACAGGCCCAGAATTTGATTCAGGCTGGTGTCGACGGCTTGCGGATTGGGATGGGTTCTGGATCTATCTGTACCACGCAGGAGGTTTGTGCGGTTGGACGAGGGCAGGCGACTGCGGTTTACAAGGTCTCATTAGTTGCTTCGCAAAGTGGCGTGCCTGTAATTGCCGATGGTGGTATTTCAAACTCTGGGCATATTGTTAAGGCTCTAGTTCTTGGTGCATCCACGGTAATGATGGGAAGTTTCTTGGCTGGAAGCACCGAGGCCCCTGGGGCCTTCGAAACTAAGAATGGTCAGCGTGTGAAAAAGTACCGGGGGATGGGTTCTTTAGAAGCAATGACCAAAGGCAGTGATGCCAGATACTTGGGGGATACTGCAACCCTAAAGATAGCTCAGGGGGTTGTTGGAGCAGTTGCTGATAAGGGTTCAGTCTTGAAGTTCATACCCTACACAATGCAAGCAGTAAAGCAAGGGTTCCAAGATCTTGGTGCTTCCTCCATCAAATCTGCCCATGACCTCTTAAGCTCAAAGGTTTTAAGGCTGGAGGTCCGTACAGGGGCAGCACAGGTCGAAGGTGGAGTTCATGGATTGGTGTCTTACGAGAAGAAATCGTTCTGA 1485 50.57 MEDGFAAERLFNQGFSYTYDDVIFLPHYIDFPTDSVQLATRLTRNISLSIPCVSSPMDTVTEAYMASAMAALGGIGIIHSNSPASQQAAMVHAAKARRVPILSNPVFKSPSDRIDSEEDFASSPFVLVTEAGTAKSKLLGYVSYADWTSQENKEVKIYDYMVNSGASVPWNYDLAQVDACLEEKKSDFVTLLKDDEVVDVVTKSQVERIKSYPKLGVGSVAADGSWLVGASIGTREHDKERLKLLVQAGVNVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRIGMGSGSICTTQEVCAVGRGQATAVYKVSLVASQSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGAFETKNGQRVKKYRGMGSLEAMTKGSDARYLGDTATLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSIKSAHDLLSSKVLRLEVRTGAAQVEGGVHGLVSYEKKSF 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 495742 498461 + Lag0014407.1 Lac12g0035 588632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0035 494 Gene3D Aldolase class I 4 494 IPR013785 -
Lac12g0035 494 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 2 493 IPR005990 GO:0003938(PANTHER)|GO:0003938(InterPro)|GO:0005737(PANTHER)|GO:0006164(InterPro)|GO:0006183(PANTHER)
Lac12g0035 494 SUPERFAMILY CBS-domain pair 125 207 IPR046342 -
Lac12g0035 494 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 16 492 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
Lac12g0035 494 Pfam IMP dehydrogenase / GMP reductase domain 16 484 IPR001093 GO:0003824(InterPro)
Lac12g0035 494 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 303 315 IPR015875 GO:0016491(InterPro)
Lac12g0035 494 FunFam IMP dehydrogenase, putative 4 494 - -
Lac12g0035 494 PIRSF IMPDH 4 494 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
Lac12g0035 494 SMART IMPDH_2 15 484 - -
Lac12g0035 494 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 7 493 - -
Lac12g0035 494 CDD IMPDH 16 461 IPR001093 GO:0003824(InterPro)
Lac12g0035 494 NCBIfam IMP dehydrogenase 16 460 IPR005990 GO:0003938(InterPro)|GO:0006164(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0035 K00088 - csv:101217193 917.916