Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0052 ATGCTTTCTGATGCAGCTCAGTGGCCTTTCTTCCGCTCCCTTGCCGCCGCCACCGTCGTCCTTCCGTTCGTGGCGCCGCAGCCTCCCTCCTTGCGGTGGTTCGAAAGAGGGGGTAAAAACCTCAGTTATCTCTCACCACTCCAAGGAGGCTTTCGTTCTGCCTTTGCTATGGGGAGGAAACGTAATAACGAGAAACAAAAGGTAATTCTGCCGCCGGAGCTTCCACCGGAGATCACTGAGGAGGAAATTGAGGTCTCTGATGAGGACTTGCAGTTTGTCAATGAGAACCGAGACTATGCCATCTCTGTTTCCAGTCTAGACACTCAATCCATTACCAAGCATGTTACGCGTGTTGCTAATGTTGAAGAAGATGCTTTGGAGGCTTTATACGAGAAGCGTTTGCGCAAGAAGTCACTGCAGAAACAGGAGGAGGAAAATAAGGTCCAGGTTGATCGTGTGGATGCCCTTCCTGTCAAAACACTTGACGGGAAACTCTACTATCGGACATCCAAACCATCTGATGCACCTGAAAATGGTGCCAACGAAGAGGAAGTGGAAGAGGATCAGGTAGATAATGGTGTATTGAAGTTAACTAAAGCTGAAAGGAGGGCAAAGCAAAAGAAAATTAAGAAGGTTGCTAAGAAACAAGAGGATGTAACCAAAGCCGAAGAAGTTCAACCAACCCCACAAGCAGCAGTTGTGGCTGAAGTGGTAGAAGATCTTACGGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTGGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATGTTACAGATCGCTAAAGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCCGTTTTTAAAGACATTATACCTGGTTACCGGATTCGGCTTCCGACGGAAAAGGAGCTGGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTTCTATGAGTCTACTCTTCTCACTGCTTATAAGGGATACCTGCAGAAGCTAATGTCATTAGAAAAATTGACGTCATTTCAACATGTGGTTATTCGCTGTATCTGTACTTTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGATAGGTATCGTTGTTAAAAACATAAGCTCTCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCCATTAAGTCTTTATTCATCAACGAGGGAAAGCATGGCGGTGAAGCGACTGTGGAGGCTGTCCGGTTGATTGCTATTCATGTGAAATCTCATGACTGCCAGTTGCATCCTGATTCCATCGAGCCTTTCATATATTTAACATTTGACGAGGATCTGGGGAAAGCAGAAAAGAAAGACGAGCATAGTAAAGTGAAGAACAAAAAACACAAGAAAATAAAGAATAGGGAGGATTCAAGTCATTCGCAAGGGAATGATGGAAGACAAAGTATGAGGACAAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTACTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCGGATACACTTTCTGCTGTGTTTGAAACATATTTCCGGATCTTAAGGCATACAATGCAGTCATTAAGTGCTAGGCCTGAAGCAAGTACTACTACATCTACTACTAGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTCATCGATTTAGATTTCATGGGCGATCTTATGAATTATCTGAAAAGGCTTGCATCTGGTGGTGATAATTCTTCAGAGAAACAGTCACAATGTTTGACTGTGTCTGAGCGTCTTCAATGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTACAGGACTTCTTTGTCCAGCTGTACAATATTGTACTTGAGTACAGGCCTGGGAGAGATCGTGGTGAAGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGTCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAAGCATCTTCTTCTGAAAAATGTCAAGTGCCGCAACCTTTTGGAAAATGATGCTGGAGGAGGTTCCGTGTCTGGCTCAATTGCGAAATATCAGCCATATGCATCTGATCCAAATTTAAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTGATCTTCTGTGGAAGCATTATCATCCAGCTGTGTCAACGATGGCTGCTAGCATCTCAAGCATGAACAGTGCTCAAACCCAAGTATATATCTCCACTGTTACTCCCCAACAGGCATTCAAAGACTTGTCGCTGGAACAGGAGTCTTTTAACCCACAATTTAACGCCAAAAAAGTTAACAAGAGGAAACGAGCTACCGAATCGTCTCCTGATACGTGCAGCGCCATCGACGAAAACGAAGTGAAGGAGAAACTTTCAACAAGATTCTGTCTTCTCCGGGACATCAATGACAATCAGAGATTAAGGGCCGAATTGCACCGTACCTCTTCGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAAAAAATCTAAAAAGTCCAGGAATATTTGA 2643 43.4 MLSDAAQWPFFRSLAAATVVLPFVAPQPPSLRWFERGGKNLSYLSPLQGGFRSAFAMGRKRNNEKQKVILPPELPPEITEEEIEVSDEDLQFVNENRDYAISVSSLDTQSITKHVTRVANVEEDALEALYEKRLRKKSLQKQEEENKVQVDRVDALPVKTLDGKLYYRTSKPSDAPENGANEEEVEEDQVDNGVLKLTKAERRAKQKKIKKVAKKQEDVTKAEEVQPTPQAAVVAEVVEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRFYESTLLTAYKGYLQKLMSLEKLTSFQHVVIRCICTLLDAVPHFNFRETLIGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIAIHVKSHDCQLHPDSIEPFIYLTFDEDLGKAEKKDEHSKVKNKKHKKIKNREDSSHSQGNDGRQSMRTKFTEEVAADYRAATLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLSARPEASTTTSTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDRGEVLAEALKIMLCDDRQHDMQKAAAFIKRLSTFSLCFGSAESLAALVTVKHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELDLLWKHYHPAVSTMAASISSMNSAQTQVYISTVTPQQAFKDLSLEQESFNPQFNAKKVNKRKRATESSPDTCSAIDENEVKEKLSTRFCLLRDINDNQRLRAELHRTSSSLQLYEEYKRQKKKSKKSRNI 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 620281 629408 + Lag0014424.1 Lac12g0052 588649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0052 880 Coils Coil 197 217 - -
Lac12g0052 880 PIRSF Noc3 59 877 IPR016903 -
Lac12g0052 880 SUPERFAMILY ARM repeat 272 663 IPR016024 -
Lac12g0052 880 Pfam CBF/Mak21 family 610 765 IPR005612 -
Lac12g0052 880 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 62 821 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Lac12g0052 880 MobiDBLite consensus disorder prediction 455 488 - -
Lac12g0052 880 MobiDBLite consensus disorder prediction 168 191 - -
Lac12g0052 880 Pfam Nucleolar complex-associated protein 250 340 IPR011501 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0052 K14834 - csv:101213821 1315.06