Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0233 ATGGATTCTGGAGGAATACTCGGTTTCCAGTACGGCGTAGTTCAGGCTCCGCTTGGTCCTGATATCTCCGGTCCTCAGCTTGTTGCTGCCGTCGCCAATGCCGGTGGAATCGGTCTTCTCAGAGCCCCCGATTGGGAATGCGGACGATTTGGTGATGATTGGTTAGGATATTTTGGAGGAGTGTTGGGTTCATTCAGGGGAATCAATAATGAGTCACCGGATTATGTACGAGAATTGATAAGGAAGACCCGAGCGTTAACGGATAAACCATTTGGAGTTGGTGTCATATTAGCATTTCCTCATGAGCAAAATCTAAAGGCCATATTAGACGAGAAAGTAGCAGTTGTGCAAGTTTACTGGGGAGAATGTTCAAAAGATCTCGTAGAACAAGTTCATTCTGCCGGGGTTAAAATTATTCCACAAGTTGGGAGTGTTGAAGAAGCGAGAAAAGCAGTTGATGTTGGTGTTGATGCAATAATTGTCCAAGGACGGGAAGCGGGAGGGCATGTTATTGGTCAAGAAGGTTTGATTTCCATCTTACCAAGGGTAGTGGATATTGTTGGGAATGAAGATATACCTGTAATTGCAGCTGGCGGTATTTCAGATTCACGAGGTTATGTTGCTGCTCTGGCCCTTGGTGCTCGTGGTGTCTGCCTTGGAACTAGATTTGTTGCCACCGAAGAAAGCCATGCTCACCCTACATTCAAGAGGAAGTTGGTGGAAATGGACGCAACTGATTATACAAACATTTTTGGCCGTGCAAGATGGCCTGGTGCACCACAGCGTGTTCTACAGACACCCTTTTACGATGATTGGAAGTCACTTCCTGCCAATGAAAATGAAAGCAACCAGCCCGTCATCGGCCGTTCAACAATTAATGGCTTGGACATAGATATACGACGCTTTGCGGGTACCGTGCCAAATGCAACAGCAAAAGGTGACATTGAGAGCATGGCAATGTATGCTGGGCAAGGAGTTGGACTAATCAAGGAGATTCTACCTGCAGGAGAAGTGAATCCATGGCGGAAATTCCCTTTCACCACATTCATAGCAATGCTTTCGGCTGTTATGACTCTAATGTTGGACTCGTTTTCGATGAGTCGCTACAAAAAGCAATTGATCGTGGATCAAGCTGCAGAAGAAGGGAATAACGAGGGCAAGGAAATGGAAGCGGGGATTGTGGTGCATTCAGTAGTGATAGGGCTCTCGATGGGGGCTTCGGATAATCCTTGCACCATAAGGCCGCTCATTGCGGCGCTCTGCTTTCACCAACTCTTTGAAGGGATGGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAAGTTGAAGATGAAGGCGATAATGATATTTTTCTTCTCGATCACAACTCCATTTGGAATAACATTGGGGATTGGATTGGCGAATGTGTACAGTGAGAATAGTCCCACGGCTCTTATAGTTGTGGGGATATTGAATGTTGTGTGTGCTGGGTTGCTTTCCATCACATCTTCTCTTGAGTTTTATTCTTCTTAA 1512 46.1 MDSGGILGFQYGVVQAPLGPDISGPQLVAAVANAGGIGLLRAPDWECGRFGDDWLGYFGGVLGSFRGINNESPDYVRELIRKTRALTDKPFGVGVILAFPHEQNLKAILDEKVAVVQVYWGECSKDLVEQVHSAGVKIIPQVGSVEEARKAVDVGVDAIIVQGREAGGHVIGQEGLISILPRVVDIVGNEDIPVIAAGGISDSRGYVAALALGARGVCLGTRFVATEESHAHPTFKRKLVEMDATDYTNIFGRARWPGAPQRVLQTPFYDDWKSLPANENESNQPVIGRSTINGLDIDIRRFAGTVPNATAKGDIESMAMYAGQGVGLIKEILPAGEVNPWRKFPFTTFIAMLSAVMTLMLDSFSMSRYKKQLIVDQAAEEGNNEGKEMEAGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQAEYKLKMKAIMIFFFSITTPFGITLGIGLANVYSENSPTALIVVGILNVVCAGLLSITSSLEFYSS 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2587947 2594359 + Lag0014605.1 Lac12g0233 588830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0233 503 Pfam ZIP Zinc transporter 390 495 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Lac12g0233 503 CDD NPD_like 10 259 IPR004136 GO:0018580(InterPro)
Lac12g0233 503 Pfam Nitronate monooxygenase 6 98 IPR004136 GO:0018580(InterPro)
Lac12g0233 503 Pfam Nitronate monooxygenase 101 337 IPR004136 GO:0018580(InterPro)
Lac12g0233 503 Gene3D Aldolase class I 5 340 IPR013785 -
Lac12g0233 503 PANTHER 2-NITROPROPANE DIOXYGENASE 4 338 - -
Lac12g0233 503 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 4 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0233 Lac-Chr12:2587947 Lac1g3344 Lac-Chr1:53117715 3.10E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0233 - - - 0.0