Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0418 ATGAAACAAAGAACAAATTCTTCTGCTTTTCTTCTTCTTCTTCTTCTCTCTTCTTCATTGTTCACTCTCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCACTCCCATGGCGGCCGAAAACCCGCCGATATTGTTGCTGATTCTCATCACGAACTCCTCCGACCGTTTCTCGAAGGTGGGGATGATTTTGCGGAAGATGTTATCTTTTACTCATATACAAGACACATCAACGGCTTCGCAGCAATGTTGGAGGACGAAGTAGCCGCTCAATTAACCAAGCACCCGAAAGTGGTGTCGGTTTTTTTGAACAGAGGAAGAAAGTTACAGACAACTAGATCATGGAAGTTCATGGGATTAGAAAACAACAATGGAGTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGCCACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAAAGCTTTAGTGATGATGATGATGATTTGGGACCAATTCCTTTCAGGTGGAAAGGAATCTGCCAAAACCAACATGATCCTTCTTTCCATTGCAATAGGAAGCTCATCGGAGCAAGATACTTCCGCAAAGGCTATGAATCCGTCGTCGGCCGTCTCAATTCTTCGTTCAATTCGCCGAGGGACAACGAAGGCCATGGTTCTCACACCTTGTCGACGGCCGGCGGTAACTTTGTCGCCGGAGCTAGTGTATTCGGCTTGGGACAGGGCACCGCCAAGGGCGGATCGCCGAGGGCTCGGGTGGCCGCTTACAAGGTCTGCTGGCCTCCGGCGGCCGGAAATGAGTGCTTCGACGCCGATATCTTGGCGGCGTTTGATATGGCGATTCACGACGGCGTGGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCGAATCCGCTTTTTAACGACAGTGTTGCGATTGGCTCATTCCACGCCGTGAAGCATGGGATCGTGGTGATTTGCTCTGCCGGAAATTCTGGACCGACGGCCGGTTCGGTCACCAATATTGCGCCGTGGCAGATCACCGTTGGAGCGAGCACCATGGACAGGAAGTTTCCTAGTGGTGTCGTTCTTGGGAACAAGAAGTGGATTGAGGGTGAGAGCCTGTCCCCTGAAGCTTTGCCAAACAAGAAGTTCTATCCACTCATGAGTGCTGCAGATGTTAGATTGGCCAATGCATCCTTTCACGAAGCCCAATTGTGTAAAGCTGGTACACTCGATCCTATGAAGGCGAAGGGGAAGATCCTCATCTGCCTTCGTGGCGATAATGCTAGAGTGGACAAGGGCGAGCAAGCATTGTTGGCTGGTGCTTTGGGCATGATTCTCGCCAATAGTGAGGCCAGTGGGAATGAAATCCTTGCTGACCCACATCTCCTTCCAGCCTCACATATCAACTATACCGATGGCGTCACAGTCTTTGAATACATCAATTCAACCAAGTTGCCTGTGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCGTTTATGGCAGCATTTTCATCAGTGGGACCAAACACTGTTACTCCAGAGATCCTAAAGCCTGATGTTACAGCTCCTGGGGTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGACCAACGAATCAAGAATTTGATCATCGTCGGGTTCCTTTTAACTCAATATCCGGAACTTCCATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCCATTAAATCTGCAATCATGACCACTGCAAGCACACTAGACAACAACTTCGAGCCGCTCCTCAATGCTTCCTACTCCAAGGCCACACCATTCAACTATGGAGCAGGACACATTCATCCAAATGGTGCTACAGATCCTGGCTTGGTTTATGACATTGAGGTTAAAGAATATCTGTTATTTCTATGTGCATTAGGATATGATGAAGCTCAAATATCTCAATTCTCCGATGGTCCCTTCAATTGCTCCAAGCCTATTAGTCTAACAAATCTCAACTATCCTTCAATTACTGTCCCAAAGCTCTCTAGATCAATCACAATAACTCGAAGAGTAAAGAACGTCGGTTCTCCTGGAACCTACAAAGCCCGGATAAGAAAACCATCTGGGATATCGGTTTGGGTTAAGCCAAAGAAGTTGAAATTCACAAAGGTAGGTGAAGAGCAGAGCTTCAAAGTTCTCATGAAAGTCAAGAAACAGAATGTAGCAAGGAACTATGTGTTTGGTGATTTAACATGGTCAGATGGTAAGCACCATGTAAGAAGCCCAATTGTGGTGAAGGCAGTCTAG 2316 47.19 MKQRTNSSAFLLLLLLSSSLFTLTSAIKRSYVVYMGAHSHGGRKPADIVADSHHELLRPFLEGGDDFAEDVIFYSYTRHINGFAAMLEDEVAAQLTKHPKVVSVFLNRGRKLQTTRSWKFMGLENNNGVITSESIWKKARFGEATIIGNLDTGVWPESKSFSDDDDDLGPIPFRWKGICQNQHDPSFHCNRKLIGARYFRKGYESVVGRLNSSFNSPRDNEGHGSHTLSTAGGNFVAGASVFGLGQGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDMAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPTAGSVTNIAPWQITVGASTMDRKFPSGVVLGNKKWIEGESLSPEALPNKKFYPLMSAADVRLANASFHEAQLCKAGTLDPMKAKGKILICLRGDNARVDKGEQALLAGALGMILANSEASGNEILADPHLLPASHINYTDGVTVFEYINSTKLPVAYITRATTQLGIRPAPFMAAFSSVGPNTVTPEILKPDVTAPGVSVIAAYTEAEGPTNQEFDHRRVPFNSISGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTASTLDNNFEPLLNASYSKATPFNYGAGHIHPNGATDPGLVYDIEVKEYLLFLCALGYDEAQISQFSDGPFNCSKPISLTNLNYPSITVPKLSRSITITRRVKNVGSPGTYKARIRKPSGISVWVKPKKLKFTKVGEEQSFKVLMKVKKQNVARNYVFGDLTWSDGKHHVRSPIVVKAV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4687471 4696575 + Lag0014790.1 Lac12g0418 589015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0418 771 Gene3D Peptidase S8/S53 domain 145 641 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac12g0418 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Lac12g0418 771 SUPERFAMILY Subtilisin-like 113 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac12g0418 771 CDD PA_subtilisin_like 360 490 - -
Lac12g0418 771 Pfam PA domain 401 474 IPR003137 -
Lac12g0418 771 Pfam Peptidase inhibitor I9 30 113 IPR010259 -
Lac12g0418 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 767 IPR045051 -
Lac12g0418 771 FunFam subtilisin-like protease SBT1.5 353 497 - -
Lac12g0418 771 FunFam Subtilisin-like protease SBT1.5 144 363 - -
Lac12g0418 771 Pfam Subtilase family 142 606 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac12g0418 771 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Lac12g0418 771 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lac12g0418 771 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lac12g0418 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Lac12g0418 771 SUPERFAMILY PA domain 412 487 IPR046450 -
Lac12g0418 771 Pfam Fibronectin type-III domain 673 768 IPR041469 -
Lac12g0418 771 Gene3D - 645 771 - -
Lac12g0418 771 FunFam Subtilisin-like protease SBT5.3 20 113 - -
Lac12g0418 771 CDD Peptidases_S8_3 111 595 IPR034197 -
Lac12g0418 771 ProSiteProfiles Serine proteases, subtilase domain profile. 117 628 - -
Lac12g0418 771 FunFam p69E protein-like 645 771 - -
Lac12g0418 771 Gene3D - 353 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1618 Lac-Chr10:17263305 Lac12g0418 Lac-Chr12:4687471 1.60E-244 dispersed
Lac10g1676 Lac-Chr10:18474780 Lac12g0418 Lac-Chr12:4687471 2.00E-222 dispersed
Lac12g0418 Lac-Chr12:4687471 Lac5g0710 Lac-Chr5:8919702 4.00E-267 dispersed
Lac12g0418 Lac-Chr12:4687471 Lac5g0734 Lac-Chr5:9543800 1.30E-244 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0418 - - - 0.0