Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0566 ATGCCCCTCCATAACTCCACCGGAAAAATTCAAGCAACCTCGCCGATCTGTAAATTCCCAGTGAAGAGTCGGAGAAGTCTGATGGCGTTGAGGGTCACCATGACCTCCGGCGGAATGCCTTCGATACCGTCGTCGATATCGCCGCCGCCTGTCACTTTGCCGGTGAGAGATATCCCCGGCGGTTACGGTTGGCCGCTGTTCGGATCCATCGGCGACCGGCTGGATTACTTCTGGTTCCAAGGACCGGAGAAGTTCTTCAGAACTCGAATGGAGAAGAATCGAAGCACGGTTTTCCGTACGAATGTTCCTCCGTCGTTCCCTTTCCTCTTCGCCGATCCGAAAGTGATTGCGGTTCTCGATTGCAAGTCGTTTGCGCATCTGTTCGACATGGAAATCGTGGAGAAGAAGAATGTTCTCGTCGGCGATTTCATGCCGAGCACCAGTTTCACCGGAAATATGAGAGTCTGTGCCTATTTGGATCCATCGGAATCTCAACACTCGAAGGTAAAAAACTTCATCATAGACGTTCTACGGCGGAGCTCGAAGATTTGGATTCCAGAGCTGGAATCCAACCTCTCGACGTTATGGGACAGCATCGAATCCGAAATCGCCAAGAATGCAAAACCCAGCTACCGAATCCCTCTCCAACAAGCCCTTTTCAATTTCTTCTCCAAAACCCTCGCCGGCGCCGACACTGCAAAGTCACCGGAAGTCGCCAACTCCGGCTACATCGACATCCTCATCTGGCTCGCCCTCCAGCTCTCCCCCACCGTCCACCTCGGCGTTCTGCAACCCCTTGAAGAAATCTTCCTCCACTCCTTCCGATACCCCTTCTTCCCCGTCGCCGGCCGCTACCGGAGACTCTACGATTTCATCGAAAAACAAGGGGAAGAGGTGGTTCAGCGAGGCGTTTCCGATTTCGGATTGACAAAAGACGAAGTGATCCACAATCTACTCTTCACAATGGGATTCAACGCCTACGGTGGGTTCACTCTCTTCCTCCCGGTTCTCCTCGGCCGGATACTCAGCGACAAAACCGGATTACAGCAGAGAATCATCGAGGAAGTCAGGGCGAAATCCGGGTCGGGTCTGACGTTCGAGTCCGTGAAGGAGATGGAGCTGGTTTACTCCGTGGTGTACGAGACGCTCCGGCTGGACCCGCCGGTTCCGTCGCAGTATGCGAGGGCGAGGAAAGATTTCAAGCTGAGTTCGTACGATTCGGCGTTCAACGTGAAGAAGGGGGAGCTGCTTTGTGGGTACCAGCCGCTGGTGATGAGGGACCCGAGGGTGTTCGAGGAACCGGAGGTGTTTAAGCCGGAGCGGTTCAGAGGGGAGAAAGGGGCGGAGCTGCTGGACTATTTGTTCTGGTCGAACGGGCCGCAGACGGGGACGGCGAGCGAGAAGAACAAGCAGTGCGCCGGGAAGGATTTGGTGGTGCTGACGGCGGTGGTGTTTGTGGCTTACATGTTTCGAAGGTATGATCTGATTGCGGCGGAGGGAGAGTCGATTACAGCACTTCAAAGGGCTAATTGA 1533 54.66 MPLHNSTGKIQATSPICKFPVKSRRSLMALRVTMTSGGMPSIPSSISPPPVTLPVRDIPGGYGWPLFGSIGDRLDYFWFQGPEKFFRTRMEKNRSTVFRTNVPPSFPFLFADPKVIAVLDCKSFAHLFDMEIVEKKNVLVGDFMPSTSFTGNMRVCAYLDPSESQHSKVKNFIIDVLRRSSKIWIPELESNLSTLWDSIESEIAKNAKPSYRIPLQQALFNFFSKTLAGADTAKSPEVANSGYIDILIWLALQLSPTVHLGVLQPLEEIFLHSFRYPFFPVAGRYRRLYDFIEKQGEEVVQRGVSDFGLTKDEVIHNLLFTMGFNAYGGFTLFLPVLLGRILSDKTGLQQRIIEEVRAKSGSGLTFESVKEMELVYSVVYETLRLDPPVPSQYARARKDFKLSSYDSAFNVKKGELLCGYQPLVMRDPRVFEEPEVFKPERFRGEKGAELLDYLFWSNGPQTGTASEKNKQCAGKDLVVLTAVVFVAYMFRRYDLIAAEGESITALQRAN 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6000830 6004453 + Lag0014938.1 Lac12g0566 589163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0566 510 Gene3D Cytochrome P450 53 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 Pfam Cytochrome P450 345 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 PRINTS E-class P450 group IV signature 372 388 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 PRINTS E-class P450 group IV signature 409 423 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 PRINTS E-class P450 group IV signature 472 490 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 CDD CYP74 87 502 - -
Lac12g0566 510 FunFam Allene oxide synthase, chloroplastic 53 509 - -
Lac12g0566 510 SUPERFAMILY Cytochrome P450 53 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac12g0566 510 PANTHER CYTOCHROME P450 26 59 493 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0566 Lac-Chr12:6000830 Lac6g0369 Lac-Chr6:3068217 2.70E-102 dispersed
Lac12g0566 Lac-Chr12:6000830 Lac4g1576 Lac-Chr4:34389624 2.10E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0566 K10528 - csv:101223126 799.66