Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0685 ATGGGTTGGAAGAGATCTTCGAGGAATGGCACTTTGAGGATCTGCGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGCGATTTTGCTGCTATTAGTAGCTTACACACTGCACTGGGACTCCCCAATCTTCCTGGATGGGGCACTGGGCAAGACCCATGCGGAGATGCATGGCAGGGTGTTGTATGTAATGATTCGAGCATCATTAAAATAATCGTTAATGCTGCTAATTTGGGAGGTGAACTGGGTGACAACTTGGGAATGTTTTCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGGAGTATTCCATCCAGTTTACCCGTTACTATTCAGAACATTTTTCTTTCAGCTAACGAGTTCACTGGCAGCATTCCGAGTTCATTATCATCCTTGATTCAATTGACAGCCATGTCGTTGAATGATAACAAATTGAGTGGACAAATACCAGATTCCTTTCAAGCCATTACTCAACTGGTCAATTTGGACTTATCCAATAACAACTTTAGTGGGCCACTGCCTCCATCCGTAAGCAATTTATTGGCACTGACCACCCTTCATCTGCAGAATAATCAGCTATCAGGGACCCTCGATGTTCTACAAGACCTTCCACTAAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGAGTATTCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCGACACCTCCTCCTTCTGTATCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCACCACCATCTCCTCCTCCAAAACCTAAGAAACAGGCTGATGGACCATCTGCACCTGAGGAATCCAGTACGGGAAGAAATAAGAAAAGCACTAAAAGGGTTGTTTTGATAACAATTGCAGTGGTCTTGTCATTCATAATCCTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAACGGTTGATAGTTCCAAGCGACATCATCAGATAGGTGCCTATAGGGGTGAGAGAGAAAATGCTGGAAATGAGGGACCCATGCACCATCCAATTGATCAGATACCTAAAGTTTCAAAAGAGGCAGTTGTAAGGCCGAAACAGGAAACTCAAATGGAGGCTCTGAAGGTTCCAAAAGCTCACGAAGAGAGAGAGAGAAACATGCCAAGAATGAGTGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCCCCTCCACCACCACCTCCTGTTGAAGAGGTCACGGTCGTGCCCAATGTTCCAGCTGAAGTTCCTCCCTTGAAGCCTCCCACCAAACATAGAATAACCTCAACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTATAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTACCTGGCCGTCAAAAAACTGGATAAAAGAGCATTCAGTCAGCAAAAGGATGATGAGTTTCTTGAGTTAGTGAATAATATCGATAGAATCCGGCATGCCAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGCAGTAGTGGAACATTGCAGGATGCACTGCACTCAGACGAAGAGTTCAGAAAGAAACTTTCTTGGAATGCCCGCATAAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTTGATGATGATCTTTCTGTGCGTGTTTCAGATTGTGGTCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAATTTGAATCAGGAATTTATACACTCGAGAGTGACGTTTACAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAATTTTTAGTAAGATGGGCGATTCCGCAGCTTCACGACATAGAGGCATTGACGAGCATGGTTGATCCTTCACTCAATGGTCGATACCCTGCCAAATCCTTGTCATACTTTGCTGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGACTGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACAGGGAAGTGGTTCAAGTGAAGATTGA 2340 44.79 MGWKRSSRNGTLRICVQVLVGFVICAAQVLFGITNPGDFAAISSLHTALGLPNLPGWGTGQDPCGDAWQGVVCNDSSIIKIIVNAANLGGELGDNLGMFSSIQTIDLSNNHIGGSIPSSLPVTIQNIFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFQAITQLVNLDLSNNNFSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNSSVSPTPPPSVSPPSKPAPAPPVSGAPPSPPPKPKKQADGPSAPEESSTGRNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRTVDSSKRHHQIGAYRGERENAGNEGPMHHPIDQIPKVSKEAVVRPKQETQMEALKVPKAHEERERNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPVEEVTVVPNVPAEVPPLKPPTKHRITSTFAKSFTIASLQQYTNSFSQENLIGEGMLGSVYRAQLPSGKYLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSSGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGIYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSTVVQDLLNMIRREPQGSGSSED 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7156009 7163737 - Lag0015057.1 Lac12g0685 589282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0685 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 567 777 - -
Lac12g0685 779 SUPERFAMILY L domain-like 49 241 - -
Lac12g0685 779 Gene3D Phosphorylase Kinase; domain 1 461 566 - -
Lac12g0685 779 Pfam Protein tyrosine and serine/threonine kinase 492 763 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac12g0685 779 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 218 768 IPR046959 -
Lac12g0685 779 SUPERFAMILY Protein kinase-like (PK-like) 464 763 IPR011009 -
Lac12g0685 779 Gene3D Ribonuclease Inhibitor 40 257 IPR032675 -
Lac12g0685 779 SUPERFAMILY Formin homology 2 domain (FH2 domain) 433 440 - -
Lac12g0685 779 Pfam Leucine Rich Repeat 148 167 IPR001611 GO:0005515(InterPro)
Lac12g0685 779 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Lac12g0685 779 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Lac12g0685 779 MobiDBLite consensus disorder prediction 247 304 - -
Lac12g0685 779 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 458 566 - -
Lac12g0685 779 Gene3D Transferase(Phosphotransferase) domain 1 568 772 - -
Lac12g0685 779 MobiDBLite consensus disorder prediction 252 288 - -
Lac12g0685 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Lac12g0685 779 ProSiteProfiles Protein kinase domain profile. 489 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0685 Lac-Chr12:7156009 Lac12g2502 Lac-Chr12:42005360 4.90E-103 dispersed
Lac1g3304 Lac-Chr1:52814334 Lac12g0685 Lac-Chr12:7156009 9.90E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85794 PF07714 PK_Tyr_Ser-Thr 3.40E-42 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0685 - - - 0.0