Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac12g0685 | ATGGGTTGGAAGAGATCTTCGAGGAATGGCACTTTGAGGATCTGCGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGCGATTTTGCTGCTATTAGTAGCTTACACACTGCACTGGGACTCCCCAATCTTCCTGGATGGGGCACTGGGCAAGACCCATGCGGAGATGCATGGCAGGGTGTTGTATGTAATGATTCGAGCATCATTAAAATAATCGTTAATGCTGCTAATTTGGGAGGTGAACTGGGTGACAACTTGGGAATGTTTTCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGGAGTATTCCATCCAGTTTACCCGTTACTATTCAGAACATTTTTCTTTCAGCTAACGAGTTCACTGGCAGCATTCCGAGTTCATTATCATCCTTGATTCAATTGACAGCCATGTCGTTGAATGATAACAAATTGAGTGGACAAATACCAGATTCCTTTCAAGCCATTACTCAACTGGTCAATTTGGACTTATCCAATAACAACTTTAGTGGGCCACTGCCTCCATCCGTAAGCAATTTATTGGCACTGACCACCCTTCATCTGCAGAATAATCAGCTATCAGGGACCCTCGATGTTCTACAAGACCTTCCACTAAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGAGTATTCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCGACACCTCCTCCTTCTGTATCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCACCACCATCTCCTCCTCCAAAACCTAAGAAACAGGCTGATGGACCATCTGCACCTGAGGAATCCAGTACGGGAAGAAATAAGAAAAGCACTAAAAGGGTTGTTTTGATAACAATTGCAGTGGTCTTGTCATTCATAATCCTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAACGGTTGATAGTTCCAAGCGACATCATCAGATAGGTGCCTATAGGGGTGAGAGAGAAAATGCTGGAAATGAGGGACCCATGCACCATCCAATTGATCAGATACCTAAAGTTTCAAAAGAGGCAGTTGTAAGGCCGAAACAGGAAACTCAAATGGAGGCTCTGAAGGTTCCAAAAGCTCACGAAGAGAGAGAGAGAAACATGCCAAGAATGAGTGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCCCCTCCACCACCACCTCCTGTTGAAGAGGTCACGGTCGTGCCCAATGTTCCAGCTGAAGTTCCTCCCTTGAAGCCTCCCACCAAACATAGAATAACCTCAACTTTTGCAAAATCTTTCACTATTGCATCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTATAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTACCTGGCCGTCAAAAAACTGGATAAAAGAGCATTCAGTCAGCAAAAGGATGATGAGTTTCTTGAGTTAGTGAATAATATCGATAGAATCCGGCATGCCAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGCAGTAGTGGAACATTGCAGGATGCACTGCACTCAGACGAAGAGTTCAGAAAGAAACTTTCTTGGAATGCCCGCATAAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTTGATGATGATCTTTCTGTGCGTGTTTCAGATTGTGGTCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAATTTGAATCAGGAATTTATACACTCGAGAGTGACGTTTACAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAATTTTTAGTAAGATGGGCGATTCCGCAGCTTCACGACATAGAGGCATTGACGAGCATGGTTGATCCTTCACTCAATGGTCGATACCCTGCCAAATCCTTGTCATACTTTGCTGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGACTGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACAGGGAAGTGGTTCAAGTGAAGATTGA | 2340 | 44.79 | MGWKRSSRNGTLRICVQVLVGFVICAAQVLFGITNPGDFAAISSLHTALGLPNLPGWGTGQDPCGDAWQGVVCNDSSIIKIIVNAANLGGELGDNLGMFSSIQTIDLSNNHIGGSIPSSLPVTIQNIFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFQAITQLVNLDLSNNNFSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKLLSIPNFRKDGNPFNSSVSPTPPPSVSPPSKPAPAPPVSGAPPSPPPKPKKQADGPSAPEESSTGRNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRTVDSSKRHHQIGAYRGERENAGNEGPMHHPIDQIPKVSKEAVVRPKQETQMEALKVPKAHEERERNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPVEEVTVVPNVPAEVPPLKPPTKHRITSTFAKSFTIASLQQYTNSFSQENLIGEGMLGSVYRAQLPSGKYLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSSGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGIYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSTVVQDLLNMIRREPQGSGSSED | 779 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7156009 | 7163737 | - | Lag0015057.1 | Lac12g0685 | 589282 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac12g0685 | 779 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 567 | 777 | - | - | |
Lac12g0685 | 779 | SUPERFAMILY | L domain-like | 49 | 241 | - | - | |
Lac12g0685 | 779 | Gene3D | Phosphorylase Kinase; domain 1 | 461 | 566 | - | - | |
Lac12g0685 | 779 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 763 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac12g0685 | 779 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 218 | 768 | IPR046959 | - | |
Lac12g0685 | 779 | SUPERFAMILY | Protein kinase-like (PK-like) | 464 | 763 | IPR011009 | - | |
Lac12g0685 | 779 | Gene3D | Ribonuclease Inhibitor | 40 | 257 | IPR032675 | - | |
Lac12g0685 | 779 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 433 | 440 | - | - | |
Lac12g0685 | 779 | Pfam | Leucine Rich Repeat | 148 | 167 | IPR001611 | GO:0005515(InterPro) | |
Lac12g0685 | 779 | Pfam | Leucine Rich Repeat | 172 | 193 | IPR001611 | GO:0005515(InterPro) | |
Lac12g0685 | 779 | Pfam | Leucine Rich Repeat | 101 | 120 | IPR001611 | GO:0005515(InterPro) | |
Lac12g0685 | 779 | MobiDBLite | consensus disorder prediction | 247 | 304 | - | - | |
Lac12g0685 | 779 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 458 | 566 | - | - | |
Lac12g0685 | 779 | Gene3D | Transferase(Phosphotransferase) domain 1 | 568 | 772 | - | - | |
Lac12g0685 | 779 | MobiDBLite | consensus disorder prediction | 252 | 288 | - | - | |
Lac12g0685 | 779 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 35 | 260 | - | - | |
Lac12g0685 | 779 | ProSiteProfiles | Protein kinase domain profile. | 489 | 767 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0685 | Lac-Chr12:7156009 | Lac12g2502 | Lac-Chr12:42005360 | 4.90E-103 | dispersed | |
Lac1g3304 | Lac-Chr1:52814334 | Lac12g0685 | Lac-Chr12:7156009 | 9.90E-146 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85794 | PF07714 | PK_Tyr_Ser-Thr | 3.40E-42 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac12g0685 | - | - | - | 0.0 |