Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0717 GCTGTGACTCTCTTAATACTCGTGATACACACTTTTTTTCCAATTTCGTATGAAGGTGCCCAGCTTTATTGGAAAAATCCGTTGAACCAGTTGAAGGTCATTTGCATAATTATTTTGGCTGCTGATTTTCTCATTTATGCTCTATATTTGTCACCGGTGGCCTTTGATTATCTTCCATTCAGAGTTGCACCATATATAAGAGTTGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATCATCATCCTGGCTGGAATGCTTGGAACATACTTGAATGTCTTGGCTCTAGGGCTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATATGTTATTTTTGAGGATACACAGCAGGGGAAAATAATATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACATCCAATAATCCAGATGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTATTGCCTCTTTTTTGTTCTTTATGTGCTGTTGGGAGTTTACTTCGTCACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAAAGTCAGCTTGCTAAACAAATTTCTGAGATGGACCGCTTGAGGAAAAGTATATTGGCCAAAGCTTTTAGTCTTATGGATACTAATAACGTTGGATTTATCAATAAAGAGCAGTGCCTTATACTTCTTGAAGAACTTAACAGATACAGGACTTTGCCGAAAATATCAAAGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCATGATTTTAAGATTAATATGAATGAGTTTGCTGATCTTTGCAATGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCCTTCATGGTTTGAAGGGTATCCTTCGATCTACCATTCAGATTTTTCAAAAAAGTTGAAAGTATTTGTGCGGAGCCCCAAATTTGGATATGCTGTATCCTTTATCCTCATACTGAACCTGGTTGCTGTTGTTATTGAAACAACTCTTGATATAGAAAACAATGTTGGTCAGAAAGCATGGCAAGAACTTGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGGTCTAAAAATCTACGCATTTGGGTTTATGAATTATTGGAGAGATGGGCAAAATCAGTTTGATTTCATTGTCACGTGGATTATAGTGATTGGAGAAACTATAACTTTTGTGGCACCTAGTGGACTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGCCTGATAAGGCTCCTAATGCATGTCCAGCAATATCGAGCATTTCTTGCTACCTTTTTAACTCTCATCCCTAGTTTGATGCCATATCTAGGAACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGAATTGTTAATGCTGGAAATGTCAATTTGCCTAAGACTGATCTGGATGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACTCTCTTTAATTTGCTAGTTATGGGAAACTGGCAAGTCTGGATGCAGAGCTACAAGGAATTAACAGGAAGTATTTGGACCCTCGTTTATTTTATCAGTTTCTACCTAATAACTGTTTTGCTGCTCTTAAATTTGGTTGTAGCTTTTGTCTTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGATCAGGACGGAGATAGTAGAAAGGATCGTCGACGTTTCGTTGGCACAAAAACTCGGAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATAACAAGGATTCCGATTAG 1824 37.83 AVTLLILVIHTFFPISYEGAQLYWKNPLNQLKVICIIILAADFLIYALYLSPVAFDYLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTQQGKIIFTSFGATLYQMFILFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTNNVGFINKEQCLILLEELNRYRTLPKISKDDYELIFDELDDSHDFKINMNEFADLCNAIALKFQKEDIPSWFEGYPSIYHSDFSKKLKVFVRSPKFGYAVSFILILNLVAVVIETTLDIENNVGQKAWQELEFVFGWIYVVEMGLKIYAFGFMNYWRDGQNQFDFIVTWIIVIGETITFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVQQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGIVNAGNVNLPKTDLDDDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGSIWTLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDGDSRKDRRRFVGTKTRSRKVDILLHHMLSAELDNKDSD 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7470164 7492243 + Lag0015089.1 Lac12g0717 589314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0717 607 FunFam Two pore calcium channel protein 1 431 588 - -
Lac12g0717 607 SUPERFAMILY Voltage-gated potassium channels 305 551 - -
Lac12g0717 607 FunFam Two pore calcium channel protein 1 298 430 - -
Lac12g0717 607 Pfam EF-hand domain pair 203 267 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 Gene3D - 77 185 - -
Lac12g0717 607 CDD EFh 203 267 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 Gene3D - 297 430 IPR027359 -
Lac12g0717 607 Gene3D - 186 269 - -
Lac12g0717 607 ProSiteProfiles EF-hand calcium-binding domain profile. 198 233 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 Pfam Ion transport protein 308 551 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac12g0717 607 Pfam Ion transport protein 5 187 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lac12g0717 607 Gene3D - 431 590 - -
Lac12g0717 607 SUPERFAMILY EF-hand 194 286 IPR011992 -
Lac12g0717 607 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 605 IPR044581 GO:0000325(PANTHER)|GO:0005245(InterPro)|GO:0005245(PANTHER)|GO:0005774(PANTHER)|GO:0006816(PANTHER)
Lac12g0717 607 SMART efh_1 202 230 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 SMART efh_1 243 271 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 ProSiteProfiles EF-hand calcium-binding domain profile. 239 274 IPR002048 GO:0005509(InterPro)
Lac12g0717 607 FunFam Two pore calcium channel protein 1 77 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0717 K16900 - csv:101206980 1087.02