Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0721 ATGTCTTCTTCTTCACTCACTCGCTTCTGCGCCGTTGTTTCGATTCTGATCTCCATTCCCATCTCAGTCTCTGCTACAGAGTTCGTCTTCAACACTAATTTCACTTCCACTGATGTTTTGCTGTTCGGCAACGCCACCGTTGAATCTTCTGTTCTTATTCTCACCAGGGATTCCTCTTTCAACATCGGCCGTGCCCTTTACCCCTTCAGAATCCCGATCCCCAAATCTCCTCCCGGCCATGGATTTGCGTTTCTCTTCACACCCTCTACTGGAATCAATGGCACCAGCTCGGCTCAGAACTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAACAACCATGTCTTCGCTGTGGAGTTCGATTCCTTCCAGAATGAAGAGTTCAACGATACGAATGATAACCATGTCGGCGTGGATTTGAATTCTCTCGTGTCTACTGTTTCTTCACCAGCAGGGTTCTGGGGTGGACGAGGTGATGGAGAATTCAAGGCGTTGAAGATTAACAATGGAGAAACTTATCAGGTTTGGATTGAATGTTTAAATTCTTTAGTTAATATTACAATGGCTGAAGTGGGAATGAAAAGGCCTAGAAGGCCATTGATATCTCTGTCTGTTACCTTTCCTGAATTGCTTTTGGATGAGATGTATGTGGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCACTAACTTGTCAATTGGTGATGCTTTAGTTAGAACGAATTTGCCATCTTTTGCTCCTCAAAATGACTCCATTTTCGACTCGAAAGCTTTCGTTGTGGGGATAACTGTTGGTGGTGCTGGGCTTGTGATCATCTGTAGTGTTGTAATCTATGTTGTTGTAGTTGTCAAAAGGAGAGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTGGAATATTGGCCTCATCGGTTTGCTTATCAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGAGATTGGGTTGGGGCGCAATGGGAAGGTCTATAAAGGGAAATTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTCTGTTGAAGCTGAGTGTGGAATGAGGGAATTTGTGGCTGAGATTTCAAGTTTAGGAAGATTAAAACATAGAAATCTAGTAAAACTCATAGGATGGTGTAAGAAAGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAGGAAGTTATTTGAGTGTGATGAGAACACAATGCTGAGTTGGGAGAAAAGGGTGAAGGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGGTTGGGATTACAAGGTTCTCCATAGAGACATAAAGGCGAACAACGTGCTACTCGACAAGGACATGAACGCAAGGTTAGGAGACTTCGGGTTGGCTCGAATGCAACCCCACGAGCGAACGGCGGACACAACACGAGTGGTGGGAACCGTCGGATATATGGCACCAGAGGTAGTTCGAACAGGGCGAGTATCGGCACCAGCCGACGTTTTCGGGTTCGGGGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAAGCCATGGCTGATAGATTGGGTAAGAGGGGTAATGGAGAGGAATGAGCTTGTATTTGCAATTGATGAGAGATTGAAAGTTGAAAATCATGGAAATGAGATAGATGAAATGGAGAGAATGATTTGTTTGGGATTATTATGTGCACATCCTGAGGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAACATTTTGGGTGAGAGAAATGGAGGCAATTCAAATGATGGATTGTTAAATAGATTAAGATCAACAAGGATATTGTCTGAGATTTACCAAGGAAACAATTCTCAGCAAAATCATCCAACTTTGGAAGAAATCAAAACATCTTCATCTTCAACATCACTCATTGAATCAGACATTTTGAAGAGTGGCCGCTAG 1986 42.95 MSSSSLTRFCAVVSILISIPISVSATEFVFNTNFTSTDVLLFGNATVESSVLILTRDSSFNIGRALYPFRIPIPKSPPGHGFAFLFTPSTGINGTSSAQNLGLFNFTNNGSPNNHVFAVEFDSFQNEEFNDTNDNHVGVDLNSLVSTVSSPAGFWGGRGDGEFKALKINNGETYQVWIECLNSLVNITMAEVGMKRPRRPLISLSVTFPELLLDEMYVGFTAATGQLVQSHKILSWSFSTTNLSIGDALVRTNLPSFAPQNDSIFDSKAFVVGITVGGAGLVIICSVVIYVVVVVKRRGRKKPKDDEIEDWELEYWPHRFAYQDVYEATDGFSEANEIGLGRNGKVYKGKLGRSKVAVKRISVEAECGMREFVAEISSLGRLKHRNLVKLIGWCKKEKGSLILMYDYMENGSLDRKLFECDENTMLSWEKRVKVLRDVATGLLYLHQGWDYKVLHRDIKANNVLLDKDMNARLGDFGLARMQPHERTADTTRVVGTVGYMAPEVVRTGRVSAPADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVRGVMERNELVFAIDERLKVENHGNEIDEMERMICLGLLCAHPEAGARPTMQQVVNILGERNGGNSNDGLLNRLRSTRILSEIYQGNNSQQNHPTLEEIKTSSSSTSLIESDILKSGR 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7505932 7507976 + Lag0015093.1 Lac12g0721 589318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0721 661 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac12g0721 661 Pfam Legume lectin domain 69 242 IPR001220 GO:0030246(InterPro)
Lac12g0721 661 FunFam L-type lectin-domain containing receptor kinase S.4 408 611 - -
Lac12g0721 661 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 292 407 - -
Lac12g0721 661 ProSiteProfiles Protein kinase domain profile. 332 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac12g0721 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 243 IPR013320 -
Lac12g0721 661 CDD STKc_IRAK 338 603 - -
Lac12g0721 661 ProSitePatterns Protein kinases ATP-binding region signature. 338 359 IPR017441 GO:0005524(InterPro)
Lac12g0721 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac12g0721 661 MobiDBLite consensus disorder prediction 631 661 - -
Lac12g0721 661 Gene3D Phosphorylase Kinase; domain 1 302 407 - -
Lac12g0721 661 PANTHER - 42 604 IPR050528 GO:0005886(PANTHER)
Lac12g0721 661 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Lac12g0721 661 Gene3D - 24 247 - -
Lac12g0721 661 SMART serkin_6 332 600 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac12g0721 661 SUPERFAMILY Protein kinase-like (PK-like) 308 601 IPR011009 -
Lac12g0721 661 CDD lectin_legume_LecRK_Arcelin_ConA 26 241 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0721 Lac-Chr12:7505932 Lac3g0147 Lac-Chr3:1017958 5.30E-127 dispersed
Lac10g0875 Lac-Chr10:7011693 Lac12g0721 Lac-Chr12:7505932 3.00E-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85795 PF00069 Pkinase 3.20E-45 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0721 - - - 0.0