Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac12g0743 | ATGATGAAGCGTTATGTTTACATCAATGATGATGAAGCATCAAATGATCTTTATTGCGATAACCGCATTTCAAACAGGAAATACACATTATTGAACTTTCTCCCAAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATACTTTTTGTTAATTGCATGCCTACAGTTATGGCCGCTTATAACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTCATCTTCATTTTTGCTGTGTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTGTCAGACAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTAGTATGGCTCAGGGAGAATGACGAAGTGCCTTCAGATCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCCTGCATGGGAATAGATTTTGATCTATTAAACAAGATCAAGGGAGTTATAGAGTGCCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTCGGTTATTTCCTCCTTTCATTGATAATGATGTGTGCCCTTTGACCATAAAAAACACAATTCTTCAGTCATGCAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATTGACAAGTTAACTGGTGCTATATTTGTTTTTCAACTTGTGGTGGTTGTTGTTCTCGGTATAGCTGGTAATGTGTGGAAGGATTCTGAAGCCAGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAACTACTGGTCATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCCATTTCAATTAAGGTGTCTCTGGATCTTGTAAAGAGCTTATATGCAAAATTTATTGATTGGGACTATGATATGGTTGACCGTGAGACTGGTATTCCTTCCCATGCTACGAATACAGCAATAAGTGAGGACCTCGGACAAGTCGAATACATTTTGACGGATAAAACCGGTACCCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATTTTTTATGGAAATGAAAATGGAGATGCCCTGAAAGATAAAAAGTTGCTCAATGCTATTGCAAGCAGCTCTCCAGATGTTATAAGATTTCTCACAATTATGGCAATATGCAATACAGTGGTGCCTACAAAAAGCAAAAGTGGAAATATTTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTCGTGAATGCTGCTGCTTTTTTGCATATGGTATTTGTCAATAAGAATGCTAATATTCTTGAAATTCAGTTTAATGGAATGCTAAATAGATATGAGCTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGAATGTCCGTGGTCGTTAAAGATTGTCAGAATGGGAAGATTGTCCTCCTGTCAAAAGGAGCAGATGAAGCTATACTTCCTCATGCTTATGCCGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCACAACTGGGGCTCCGCACATTATGTCTGGCTTGGTGTGAATTAGAGGAAGATGAGTATCGAGAGTGGGCTTTTATGTTTAAGGAGGCTAATAGCACATTGGTTGATAGGGAGTGGAGGTTAGCTGAAGTTTGCCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATTGAAACATTAAGAAGAGCAGGAATAAATTTCTGGATGTTAACCGGAGACAAGCAAAATACTGCCATTCAAATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAGTTATTATTAATTGATGGAAAAACAGAGGATGAAGTTTGTAGAAGTTTGGAGAGAGTTGTTCTAACTATGAAGACCACGACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGTAGGGCATTCACTGAATTAGCTATACTATCAAGAACTGCAATATGTTGTCGTGTGACTCCATCACAGAAGGCTCAGCTTGTGGAACTCTTAAAATCATGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGACATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAAGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAAAGGTTGATTCTAGTTCACGGACGATACTCATACAACCGTACAGCATTTTTGTCACAATATTCATTCTATAAGTCTTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATTTCAGGTGTCTCTGGGACCAGTCTATTTAATTCTGTTAGCTTAATGGCTTACAATGTTTTCTACACCAGCATTCCTGTATTAGTTAGTGTCCTCGACAAAGATCTCAGCGAAGAAACAGTAATGCAACATCCTCAGATTTTATTCTACTGCCAAGCTGGGAGGCTTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCCGTTGTGGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAGGTTTCAATGGTGGCTCTATCTGGGTGCATATGGTTACAGGCTTTTGTAGTGACTTTGGAGACCAATTCATTTACAATGTTGCAACATATGGCCATATGGGGGAATTTAGCTGCTTTCTACGTAATCAATTGGATCTTCAGTGCCATTCCTACATCTGGGATGTATACAATAATGTTCCGCTTATGCGGACAACCATCTTATTGGATAACCATATTTCTAATAGTAGGCGTGGGAATGGGGCCACTTCTAGCTATCAAGTACTTCAGATACACATACAGACCAAGCAAAATCAACACTCTTCAGCAGGCTGAACGTTTGGGTGGGCCGATCATGTCGCTGAAAAACATAGAGCACCAGCCTCGGCCCATTGAGAAAGAAATTTCTCCACTGTCAATAACAACAACTACTCAGCCCAAGAACAGAAATACAGTTTACGAACCTCTTCTGTCAGACTCTCCTCCAAATGCCACTAGAAGATCTCTGACATCAGGAACATCTTTTGATTTCTTTCAGACACCGCCCAGTTATTCAAGAAATAAGGATAACTGA | 3270 | 40.03 | MMKRYVYINDDEASNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYDMVDRETGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDKKLLNAIASSSPDVIRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAFLHMVFVNKNANILEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLLSKGADEAILPHAYAGQQTRTFIEAVDQYAQLGLRTLCLAWCELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHMAIWGNLAAFYVINWIFSAIPTSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPIMSLKNIEHQPRPIEKEISPLSITTTTQPKNRNTVYEPLLSDSPPNATRRSLTSGTSFDFFQTPPSYSRNKDN | 1089 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7764827 | 7775304 | - | Lag0015115.1 | Lac12g0743 | 589340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac12g0743 | 1089 | Gene3D | - | 587 | 775 | IPR023214 | - | |
Lac12g0743 | 1089 | Pfam | haloacid dehalogenase-like hydrolase | 582 | 749 | - | - | |
Lac12g0743 | 1089 | SUPERFAMILY | Calcium ATPase, transduction domain A | 101 | 172 | IPR008250 | - | |
Lac12g0743 | 1089 | Gene3D | - | 81 | 228 | - | - | |
Lac12g0743 | 1089 | FunFam | Phospholipid-transporting ATPase | 434 | 577 | - | - | |
Lac12g0743 | 1089 | Gene3D | - | 432 | 567 | IPR023299 | GO:0000166(InterPro) | |
Lac12g0743 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 613 | 623 | - | - | |
Lac12g0743 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 735 | 754 | - | - | |
Lac12g0743 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 153 | 167 | - | - | |
Lac12g0743 | 1089 | PRINTS | P-type cation-transporting ATPase superfamily signature | 364 | 378 | - | - | |
Lac12g0743 | 1089 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 3 | 1008 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Lac12g0743 | 1089 | FunFam | Phospholipid-transporting ATPase | 76 | 239 | - | - | |
Lac12g0743 | 1089 | NCBIfam | HAD-IC family P-type ATPase | 702 | 819 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lac12g0743 | 1089 | SFLD | Haloacid Dehalogenase | 347 | 786 | - | - | |
Lac12g0743 | 1089 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 763 | 1002 | IPR032630 | - | |
Lac12g0743 | 1089 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 366 | 372 | IPR018303 | - | |
Lac12g0743 | 1089 | Pfam | Cation transport ATPase (P-type) | 420 | 518 | - | - | |
Lac12g0743 | 1089 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 1001 | IPR023298 | - | |
Lac12g0743 | 1089 | SUPERFAMILY | HAD-like | 353 | 779 | IPR036412 | - | |
Lac12g0743 | 1089 | MobiDBLite | consensus disorder prediction | 1038 | 1089 | - | - | |
Lac12g0743 | 1089 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 371 | 558 | IPR023299 | GO:0000166(InterPro) | |
Lac12g0743 | 1089 | NCBIfam | phospholipid-translocating P-type ATPase | 408 | 1008 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
Lac12g0743 | 1089 | SFLD | p-type atpase | 347 | 786 | IPR044492 | - | |
Lac12g0743 | 1089 | FunFam | Phospholipid-transporting ATPase | 587 | 774 | - | - | |
Lac12g0743 | 1089 | Pfam | Phospholipid-translocating ATPase N-terminal | 6 | 71 | IPR032631 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0743 | Lac-Chr12:7764827 | Lac1g1774 | Lac-Chr1:39245090 | 2.60E-147 | dispersed | |
Lac12g0743 | Lac-Chr12:7764827 | Lac13g0439 | Lac-Chr13:3104800 | 6.50E-138 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac12g0743 | K01530 | - | csv:101210900 | 2065.43 |