Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0765 ATGGAAGTTGAAGACGACTACCGAAGAAAACAGCAACTCGTTCTTGTGGCAATTGTTGTACTTGCCTCTCTCGCTCTCGTTTCCTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGCTCTCCAAACGCCTCAAGATCCGCAAAAGTACGCCTCCTTCATTTGGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAATGTTAAAGAATTTTCCACCGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTACACTCAGCAACTGGTGGTTTTAGCAAGTCAAATGTGGTCGGACATGGTAGCTTTGGGTATGTATACCGAGGTGTCCTCAACGATGGGAGGAAGGTTGCAATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGACGAATTCAAAGTGGAGGTGGAATTGTTGAGTCGGCTTCATTCGCCATATTTGTTGGCATTGCTCGGATATTGCTCAGATAGCAATCACAAATTGCTGGTATATGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTGTACCCGGTTAGCAGTTCAAATTCCGTCAGTGTTAAGTTGGACTGGGAAATGCGGTTGAGAGTTGCTCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTTAGTCCTCCAGTAATTCACAGGGATTTCAAGAGCAGCAATGTCCTATTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATTGGCTCGGACAAAGCTGGGGGTCACGTCTCCACTCGAGTATTGGGGACACAAGGATACGTTGCCCCTGAGTATGCGCTAACAGGGCATTTAACTACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCTCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAAAGTGATGCATATCATGGATCCTGTGTTGGACGGTCAGTACTCGATGAAGGATGTTGTTCAAGTCGCAGCAATTGCAGCCATGTGTGTTCAACCAGAGGCGGATTACAGGCCACTGATGGCCGATGTTGTCCAATCACTGGTTCCATTGGTGAGAAATTACAGGACAACTTCAAAGATTGGTAGCAGTTCTAGTTCCAGTGCTACCAAGTCGCCTGTGGCGCATGACAATGCTAGTTCGGGAGACTGA 1218 46.63 MEVEDDYRRKQQLVLVAIVVLASLALVSLLVAFSYYCYISNKLSKRLKIRKSTPPSFGADLEDGGSFENVKEFSTEKGLQVFTFKQLHSATGGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWEMRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPVLDGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTTSKIGSSSSSSATKSPVAHDNASSGD 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8015924 8019069 - Lag0015137.1 Lac12g0765 589362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0765 405 ProSitePatterns Protein kinases ATP-binding region signature. 100 122 IPR017441 GO:0005524(InterPro)
Lac12g0765 405 Pfam Protein tyrosine and serine/threonine kinase 97 370 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac12g0765 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac12g0765 405 MobiDBLite consensus disorder prediction 381 405 - -
Lac12g0765 405 ProSiteProfiles Protein kinase domain profile. 94 374 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac12g0765 405 SUPERFAMILY Protein kinase-like (PK-like) 69 370 IPR011009 -
Lac12g0765 405 PANTHER OS01G0750732 PROTEIN 16 397 IPR050885 -
Lac12g0765 405 CDD STKc_IRAK 100 373 - -
Lac12g0765 405 FunFam Serine/threonine-protein kinase PBS1 62 169 - -
Lac12g0765 405 FunFam Receptor-like serine/threonine-protein kinase ALE2 170 390 - -
Lac12g0765 405 Gene3D Phosphorylase Kinase; domain 1 62 169 - -
Lac12g0765 405 Gene3D Transferase(Phosphotransferase) domain 1 170 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0765 Lac-Chr12:8015924 Lac3g2607 Lac-Chr3:39996838 4.10E-114 dispersed
Lac10g2665 Lac-Chr10:40804942 Lac12g0765 Lac-Chr12:8015924 6.90E-70 transposed
Lac4g1740 Lac-Chr4:36283991 Lac12g0765 Lac-Chr12:8015924 2.00E-71 transposed
Lac7g1172 Lac-Chr7:10801545 Lac12g0765 Lac-Chr12:8015924 2.20E-70 transposed
Lac10g0957 Lac-Chr10:7643485 Lac12g0765 Lac-Chr12:8015924 1.20E-26 wgd
Lac12g0765 Lac-Chr12:8015924 Lac3g1027 Lac-Chr3:8360370 9.00E-85 wgd
Lac12g0765 Lac-Chr12:8015924 Lac6g2998 Lac-Chr6:47585561 3.60E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85798 PF07714 PK_Tyr_Ser-Thr 5.70E-44 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0765 - - - 0.0