Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0775 ATGGCTTCCTCTAAAGACCGCGAGAACTTCGTTTACGTCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACGGTTGAGGAAAGGAATTTACTCTCTGTTGGATACAAGAATGTGGTTGGTGCACGGAGAGCCTCGTGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCAAAACGCATCAAGGAATACAGACAAAAGGTTGAGTCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCCTCGGCTTCAGCTGGGGAGTCGACAGTATTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAACGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCGGTTCAGCAGAATCTGAATTGCCTCCTACACATCCTATCCGCTTGGGTTTGGCATTGAATTTCTCAGTCTTCTATTATGAAATCTTGAATTTGCCTGAAAGGGCCTGTCACCTTGCAAAGCAAGCCTTTGATGAAGCCATCTCCGAACTTGACACCCTGAATGAGGAGTCATACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCGTAGAGGATGGAGATGATGCCCAAAAGATCAATGGTACTGCCAAGGTTACCGGTGGAGACGATGCCGAGGTTCTATTGATTAATGTGACAATGCTTCTAAGATGGCCCCACCTTGTTGTTGCATTGGCCCATTTAGATTGGAATAAACTGTGGAATCATTTCTTTATGCTCTCCACGCCACCTCGTGTCATCAAATTTTGGTTCAAAGTAACACGACACCGCATCCCATTTGGCATTTGA 954 43.82 MASSKDRENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATGSAESELPPTHPIRLGLALNFSVFYYEILNLPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIVEDGDDAQKINGTAKVTGGDDAEVLLINVTMLLRWPHLVVALAHLDWNKLWNHFFMLSTPPRVIKFWFKVTRHRIPFGI 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8129676 8134150 + Lag0015147.1 Lac12g0775 589372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0775 317 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lac12g0775 317 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lac12g0775 317 FunFam 14-3-3 protein epsilon 2 248 - -
Lac12g0775 317 PANTHER 14-3-3 PROTEIN 6 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Lac12g0775 317 Coils Coil 195 215 - -
Lac12g0775 317 SMART 1433_4 7 248 IPR023410 -
Lac12g0775 317 Pfam 14-3-3 protein 14 235 IPR023410 -
Lac12g0775 317 Gene3D - 1 249 IPR036815 -
Lac12g0775 317 Coils Coil 13 33 - -
Lac12g0775 317 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lac12g0775 317 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0775 Lac-Chr12:8129676 Lac13g0369 Lac-Chr13:2618890 1.10E-106 dispersed
Lac12g0775 Lac-Chr12:8129676 Lac6g0892 Lac-Chr6:7867681 2.70E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0775 K06630 - csv:101208446 496.508