Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g0931 ATGCATCGTCCTCCTCGATCGCATCATGGCACTTCTCTCTCTCGGCCCTCTGACATGGCCCGATGGGCGACACTCGACGTGCCACCACTTCACTGTCTGCTCAGTGAGGGTCACAACCTACTCTCTACTAGTATGGTTGTGACACTTAGCCCCCCTCTATATACCTCTGTTTTGGATCCCTCTTCCACGGAAGAGGGCATGGGCTTGTGGATCGGGTCTTTACCTGATGGTTTTTGTAACCTCTTTAATGAGCTTCAGACTTCAACAATGGCCATTGAAACAAACCAAACAAACGAATTCATTTTCCGCTCGAAGCTCCCCGATTTTCACATTCCCAATCATCTCCCTCTTCACGAATACGTCTTTCAGACCAACGCCAAATTCGGCTCACGCCCATGTTTGATCAACGGCGCCACCGGCGACGTCTACTTGTACGACGACGTTCAGTTAACGTCCCGTCGAGTCGCCAGTGGCCTCCACACCCTCGGCATTAAGAAGGGCGACGTCATCATGAATTTGCTTCCCAACTCGCCGGAGTTCGTCTTCACCTTCCTCGCCGCCTCCTCCCGTGGCGCCATCATGACGGCTGCGAACCCGTTTTACACGACGGTGGAAATCGATGTAGAAAAAATAGAAGATGAGAAGAAGAAGAAAGGAAGAGAAAGAAGAAGAAGAGAAGAAGAGAAGAAGAAGAAAGAAGGAAAAAAAAAATTCCGGCGACCGCAGCCGCCGTTCGCCGGCAGCCGGCAACGGCCGGCCACCGGAGCTGAAGAAGATGGGAGGGGGAAGGAAGAAGGAAAGAAGGTGGAGAAGAAAGAAGATGGAGAAGATAGAGAGAGAATTTTAAAAATAATAATAAAATAA 864 50.23 MHRPPRSHHGTSLSRPSDMARWATLDVPPLHCLLSEGHNLLSTSMVVTLSPPLYTSVLDPSSTEEGMGLWIGSLPDGFCNLFNELQTSTMAIETNQTNEFIFRSKLPDFHIPNHLPLHEYVFQTNAKFGSRPCLINGATGDVYLYDDVQLTSRRVASGLHTLGIKKGDVIMNLLPNSPEFVFTFLAASSRGAIMTAANPFYTTVEIDVEKIEDEKKKKGRERRRREEEKKKKEGKKKFRRPQPPFAGSRQRPATGAEEDGRGKEEGKKVEKKEDGEDRERILKIIIK 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10024317 10026989 + Lag0015303.1 Lac12g0931 589528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g0931 287 Gene3D - 94 219 IPR042099 -
Lac12g0931 287 Coils Coil 208 231 - -
Lac12g0931 287 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 96 206 - GO:0016405(PANTHER)
Lac12g0931 287 MobiDBLite consensus disorder prediction 214 233 - -
Lac12g0931 287 SUPERFAMILY Acetyl-CoA synthetase-like 103 205 - -
Lac12g0931 287 MobiDBLite consensus disorder prediction 214 287 - -
Lac12g0931 287 Pfam AMP-binding enzyme 123 206 IPR000873 -
Lac12g0931 287 MobiDBLite consensus disorder prediction 254 287 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g1957 Lac-Chr10:26675414 Lac12g0931 Lac-Chr12:10024317 2.30E-09 dispersed
Lac12g0931 Lac-Chr12:10024317 Lac4g2711 Lac-Chr4:46070636 8.70E-58 dispersed
Lac12g0083 Lac-Chr12:992792 Lac12g0931 Lac-Chr12:10024317 1.70E-10 transposed
Lac2g1321 Lac-Chr2:11022142 Lac12g0931 Lac-Chr12:10024317 6.70E-13 transposed
Lac1g0642 Lac-Chr1:15384115 Lac12g0931 Lac-Chr12:10024317 1.00E-10 wgd
Lac12g0931 Lac-Chr12:10024317 Lac5g1138 Lac-Chr5:19396644 2.10E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g0931 K01904 - csv:101218595 204.142