Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g1394 ATGCAAACAACAAGTGACTTTGTTCCTATTTTTGGTTACCGAAGAAGGTCCTACTTAATTTTATCAAGGCTCGTTGGTGCGTTCTCATTGAGCTTTATGGCTACCATTGTTAATAGCAAGTATGGTACTGCTACGTGTATACTTCTCGGGTCTCTTTCTGTGGCGTTTTCTGATGTTGGTTGTGTTAGGTATTTGAAACCTAACAAGTTTTTTGGTGAGATAATAGTTAAGTTGAATTATAGGCCAAAACATCCCAAAACTGTGTTGATTATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGCATTAAAATCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGGTACAACCAAAAGCTAAAAAGCCTTGTGAACTATTGTCTGATTCTCAACTTTAGGAAACCTACAAAACAACAGGAACTAGCAGAAAGAGTTAATGGGGATATACTTATGGCATTAAATCAGTTGCAGTACCTGAGTCTGTCAATGTCAGTTATTAAATATGACGATATTCGTCAACGGCTTATGGGCAGTATGAAAGACAAAGACATCTCACCATTCACTGCTGACAAGTGTTGGGTTCCTAGACGGATTCCTCCCGGAACTCCGGATCTTTTGGGATGTGTTTCAACCCCAATGAAGTGTGACCGATCAGGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATGATCGTAATGTGGAGAATTGCCACACACTCTCTAAATCATCCCTGA 789 41.06 MQTTSDFVPIFGYRRRSYLILSRLVGAFSLSFMATIVNSKYGTATCILLGSLSVAFSDVGCVRYLKPNKFFGEIIVKLNYRPKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYNQKLKSLVNYCLILNFRKPTKQQELAERVNGDILMALNQLQYLSLSMSVIKYDDIRQRLMGSMKDKDISPFTADKCWVPRRIPPGTPDLLGCVSTPMKCDRSGTRQLAIPSSVTGVHQYTMIVMWRIATHSLNHP 262
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 23379581 23382695 - Lag0015766.1 Lac12g1394 589991
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac12g1394 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 184 IPR027417 -
Lac12g1394 262 Gene3D - 50 145 IPR027417 -
Lac12g1394 262 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 73 200 - GO:0003677(PANTHER)|GO:0005634(PANTHER)
Lac12g1394 262 Pfam BT1 family 5 59 IPR039309 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1164 Lac-Chr11:15018804 Lac12g1394 Lac-Chr12:23379581 2.10E-24 dispersed
Lac12g1394 Lac-Chr12:23379581 Lac9g2747 Lac-Chr9:45641661 9.70E-56 dispersed
Lac12g1393 Lac-Chr12:23369568 Lac12g1394 Lac-Chr12:23379581 4.30E-11 tandem
Lac12g1394 Lac-Chr12:23379581 Lac13g2182 Lac-Chr13:33333581 3.10E-09 wgd
Lac12g1394 Lac-Chr12:23379581 Lac3g2239 Lac-Chr3:29820893 1.20E-08 wgd
Lac12g1394 Lac-Chr12:23379581 Lac6g1781 Lac-Chr6:28163464 6.80E-09 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g1394 K10754 - rcu:8281056 200.675