Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac12g1666 | ATGGCTTCTCTTCCTCGAAAGCAAGCAATCCATGGCAGCTTTCTGCTTCTTCTCCTCTTCCTCTCTCTCCCATCTCTGTCCGTCGCTGTCACTAAAGCCGAAGCTTCGTATATCGCTATTCGCCAACTCCATGCTTTGAGAGAACACGATGAGCTCCCAGATGACTACAAATACGAACTCGACATTCCCGACACTTTTCCACATGAGAGGTTGAAGAAGGCTTATGTTGCCCTTCAAGCTTGGAAAGGGGCCATCTATTCTGACCCTAAGAACATCACTGCCAATTGGGTTGGGGCTGATGTCTGCTCTTACACTGGCGTTTTTTGTGCTCCGGCGCTTGATGACTCCAAGATTGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGCTATTTCCCGCCAGAGTTTGGCCTCTTGACGGATTTAGCTTTGGTACATATCAACTCCAATAGGTTTTGTGGGATCATTCCAACTAGCTTTTCTAAGCTCACTCTCATGTACGAGTTTGATATCAGTAACAACCGCTTCGTGGGCAAATTCCCTGAGGCTGTCCTCGAGTGGCCGAACGCTCAGTACCTCGATCTCAGGTACAACGAGTTCGAAGGAGAAATCCCATGGTCACTCTTCACAAAAACGTACGACGTCATATTCATAAACAACAACAGATTCACATCCCAAATCCCGGAAAGCATTGGAAACTCCACCGTCTCCATCCTCAACTTCGCCAACAACGAGTTCTATGGCTGCATTCCCAAAAGCATCGGCCAGATGACCTACCTCAAACAGCTCCTCTTCATTGGCAATAAGCTCGGCGGCTGTGTCCCGGCAGAGATGGGAAACCTCGTCAATCTGACAGTACTCGACCTCAGCTTCAATGGCCTCATTGGCGAACTGCCAACATCCATTTCGGGGCTGAAGAATTTGGAGGTTGTGGACATCAGTTACAATGAATTTAGGGGTTCTGTTTCTAGGGAGCTCTGCGAATTGCCCAAGTTGGAGAACTTCACCGTCGCATTTAATTATTTTGATGAAGTAGATCCAAACTGTATTAGGCCTAAGGGATCCAAGAAACTTTTTGATGATGCACAAAATTGTTTGACAAATCGACCGGAGCAGAGAGATGAGGACAAATGTTACTCTCTTTTGAAGAACACAGTGGATTGTGCTGGAATCTGTCGTGAGAATCCACACGGAAAGTTTTCAATACCCAGCGATAGGTCGCCAACTGAATCGGTTGACACCCCTGTTCCAGAAGTTGGCTCTCCACCATCTCCATCTGAATCCTCAGTTCCATCCACCCCAGATGCTCAACCTCCACCGGTCCACTCTCCACCTCCACCAGTTTACTCCCCACCACCACCCGTCCACTCCCCTCCACCACCGGTCTACTCTCCACCACCCCCCGTCCACTCCCCACCACCCCCAGTCTACTCCCCGCCACCACCGGTCCACTCCCCACCACCACCAGTCTACTCCCCGCCACCACCGGTCCACTCCCCACCACCACCAGTCTACTCGCCACCACCACCAGTCCACTCCCCGCCACCCCCTGTCCACTCTCCCCCACCACCGGTCTTCTCCCCCCCACCACCCCCTATCCACTCTCCCCCACCACCACCGGTCCATTCCCCACCACCACCGATCTACTCTCCACCACCACCGGTCTACTCCCCACCACCACCAACCGCATCTCCTCCTCCTCCCGGTGCTCCTCCACCGCCGTCGTTCGAGGAAGTCATCCTCCCACCAAATATCGGCTTCCAATACGCATCGCCACCTCCACCATTGTTCCCTGGCTATTGA | 1812 | 52.26 | MASLPRKQAIHGSFLLLLLFLSLPSLSVAVTKAEASYIAIRQLHALREHDELPDDYKYELDIPDTFPHERLKKAYVALQAWKGAIYSDPKNITANWVGADVCSYTGVFCAPALDDSKIEVVAGIDLNHGDIAGYFPPEFGLLTDLALVHINSNRFCGIIPTSFSKLTLMYEFDISNNRFVGKFPEAVLEWPNAQYLDLRYNEFEGEIPWSLFTKTYDVIFINNNRFTSQIPESIGNSTVSILNFANNEFYGCIPKSIGQMTYLKQLLFIGNKLGGCVPAEMGNLVNLTVLDLSFNGLIGELPTSISGLKNLEVVDISYNEFRGSVSRELCELPKLENFTVAFNYFDEVDPNCIRPKGSKKLFDDAQNCLTNRPEQRDEDKCYSLLKNTVDCAGICRENPHGKFSIPSDRSPTESVDTPVPEVGSPPSPSESSVPSTPDAQPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVFSPPPPPIHSPPPPPVHSPPPPIYSPPPPVYSPPPPTASPPPPGAPPPPSFEEVILPPNIGFQYASPPPPLFPGY | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 32195417 | 32197228 | - | Lag0016038.1 | Lac12g1666 | 590263 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac12g1666 | 603 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 254 | 348 | - | - | |
Lac12g1666 | 603 | Gene3D | Ribonuclease Inhibitor | 239 | 388 | IPR032675 | - | |
Lac12g1666 | 603 | Gene3D | Ribonuclease Inhibitor | 73 | 238 | IPR032675 | - | |
Lac12g1666 | 603 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 15 | 521 | IPR051582 | - | |
Lac12g1666 | 603 | MobiDBLite | consensus disorder prediction | 400 | 603 | - | - | |
Lac12g1666 | 603 | Pfam | Leucine rich repeat N-terminal domain | 77 | 109 | IPR013210 | - | |
Lac12g1666 | 603 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Lac12g1666 | 603 | Pfam | Leucine Rich Repeat | 194 | 211 | IPR001611 | GO:0005515(InterPro) | |
Lac12g1666 | 603 | PRINTS | Proline rich extensin signature | 406 | 422 | - | - | |
Lac12g1666 | 603 | PRINTS | Proline rich extensin signature | 436 | 457 | - | - | |
Lac12g1666 | 603 | PRINTS | Proline rich extensin signature | 457 | 473 | - | - | |
Lac12g1666 | 603 | PRINTS | Proline rich extensin signature | 474 | 491 | - | - | |
Lac12g1666 | 603 | MobiDBLite | consensus disorder prediction | 421 | 582 | - | - | |
Lac12g1666 | 603 | SUPERFAMILY | L domain-like | 75 | 362 | - | - | |
Lac12g1666 | 603 | Pfam | Leucine rich repeat | 286 | 344 | IPR001611 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g1666 | Lac-Chr12:32195417 | Lac4g0561 | Lac-Chr4:12624701 | 3.30E-06 | dispersed | |
Lac12g1666 | Lac-Chr12:32195417 | Lac2g0269 | Lac-Chr2:2033572 | 4.50E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac12g1666 | - | - | - | 0.0 |