Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g1686 ATGGCCCGTTTGCTACTACCCGACTCGAAGCGCTGCCGCCGCGTTTCTCCAGCTGCAGTCGCAACCCAAGCCGTCGCAACCTTCCTTCCGTCGCCGTCTGTGTCGCCGGTGTTTCAGCGTCGGCCAGGAGCTTCGTTTCCTCGATTCAATTCAGGGTTGCGTGATATAGTTTCCCACAAATTTGAAAGAATGCCGGCCATTACTCGAGGAAATCATTGTAAGATCCGAGTGACTGATGGATCTGTAATGGAGTCCACTCCTCCGAAGCGGAAACTTCAACAAAGCCCCGTCTCTGAGCCGGTGAATAAATTGGCTCGACGGCGCCTCCTCAATTCGAGCCCAAACAGACCTCCACATTGCGAAGGAAAAATGTTTAATGATGACTTTCCTAAAACAGCAAAGGAAGTGTTGCACGCTTCGACAGCCCCAACTACAATCCTTTGTCGTGACGATGAACGAAGTAGAATATTCAATTTCTGCAAGGCTTGTTTGGAGCAAGAAAAAGCTGGCAGTTTGTATGTCTGTGGCTGTCCAGGAACAGGCAAATCTTTGTCCATGGACAAAGTGAAAGAGCAGTTGGCTGCTTGGGTAAAGGAGTCAGGTCTTCAGCTGCCAGACACTTTGTCCATAAACTGCGCTTCCTTGGCAAATACGTCTGATATATTCATCAAGATGATGGGTGAAGCACAACCACAGAAGAAAAAGAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTATACTCCCAAAAGGCAGAGTCATCGTGCAAGAAGATGATGAATTGGAATGCGATCGACTTAGCAGATCGCTTTCTTCCAAAACTTCAGGCACTGAATTGCAAACCTCAGGTTGTAACGTATAGGGCTTATTCCAAGGATCAGATCCTCAAGATTCTTCAACAAAGGTTAATTGCATTGCCTTTCGTTGTCTTTCAACCGCAAGCACTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTGATGTTTGCAGGAATGCCATTGAATTGTTAGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGAACTATAATGACGAGAGTGACGCTTCAGCACCTGAGTTTGTCAAAAAACAAGAGCCTCAGATTGGCCCATCCTGCGAGAACTCTATAAATAGGGGGTTCACCACCATTTCAAGGGGTCAGAATTTTGAAGCTCGAGGGCAGAGTCCAGAGCATTCTCCAAGATTCAGATTCAGAGATTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGCCGATCATCCAAGAGATCAGCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCTGA 1623 47.26 MARLLLPDSKRCRRVSPAAVATQAVATFLPSPSVSPVFQRRPGASFPRFNSGLRDIVSHKFERMPAITRGNHCKIRVTDGSVMESTPPKRKLQQSPVSEPVNKLARRRLLNSSPNRPPHCEGKMFNDDFPKTAKEVLHASTAPTTILCRDDERSRIFNFCKACLEQEKAGSLYVCGCPGTGKSLSMDKVKEQLAAWVKESGLQLPDTLSINCASLANTSDIFIKMMGEAQPQKKKNGSLTPLQHLQRLYSQKAESSCKKMMNWNAIDLADRFLPKLQALNCKPQVVTYRAYSKDQILKILQQRLIALPFVVFQPQALELCARKVAAVSGDMRKALDVCRNAIELLEVELKASSKELNYNDESDASAPEFVKKQEPQIGPSCENSINRGFTTISRGQNFEARGQSPEHSPRFRFRDSESREFCQSPESSEADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKINKPTDRTDHQANRPIQEIIKSAG 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 32647259 32654173 + Lag0016058.1 Lac12g1686 590283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g1686 540 Pfam Cdc6/ORC-like, ATPase lid domain 291 348 IPR054425 -
Lac12g1686 540 Gene3D - 127 277 IPR027417 -
Lac12g1686 540 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 84 254 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Lac12g1686 540 MobiDBLite consensus disorder prediction 81 101 - -
Lac12g1686 540 Pfam AAA domain 168 253 IPR049945 GO:0016887(InterPro)
Lac12g1686 540 MobiDBLite consensus disorder prediction 451 476 - -
Lac12g1686 540 MobiDBLite consensus disorder prediction 405 441 - -
Lac12g1686 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 348 IPR027417 -
Lac12g1686 540 MobiDBLite consensus disorder prediction 396 540 - -
Lac12g1686 540 MobiDBLite consensus disorder prediction 477 530 - -
Lac12g1686 540 Coils Coil 335 355 - -
Lac12g1686 540 Gene3D - 278 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0841 Lac-Chr11:8996838 Lac12g1686 Lac-Chr12:32647259 4.00E-08 dispersed
Lac12g1686 Lac-Chr12:32647259 Lac2g2564 Lac-Chr2:38714328 4.20E-13 dispersed
Lac9g2413 Lac-Chr9:43218926 Lac12g1686 Lac-Chr12:32647259 4.20E-52 transposed
Lac12g1686 Lac-Chr12:32647259 Lac7g1704 Lac-Chr7:21413974 2.60E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g1686 K02213 - csv:101205741 418.313