Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac12g1686 | ATGGCCCGTTTGCTACTACCCGACTCGAAGCGCTGCCGCCGCGTTTCTCCAGCTGCAGTCGCAACCCAAGCCGTCGCAACCTTCCTTCCGTCGCCGTCTGTGTCGCCGGTGTTTCAGCGTCGGCCAGGAGCTTCGTTTCCTCGATTCAATTCAGGGTTGCGTGATATAGTTTCCCACAAATTTGAAAGAATGCCGGCCATTACTCGAGGAAATCATTGTAAGATCCGAGTGACTGATGGATCTGTAATGGAGTCCACTCCTCCGAAGCGGAAACTTCAACAAAGCCCCGTCTCTGAGCCGGTGAATAAATTGGCTCGACGGCGCCTCCTCAATTCGAGCCCAAACAGACCTCCACATTGCGAAGGAAAAATGTTTAATGATGACTTTCCTAAAACAGCAAAGGAAGTGTTGCACGCTTCGACAGCCCCAACTACAATCCTTTGTCGTGACGATGAACGAAGTAGAATATTCAATTTCTGCAAGGCTTGTTTGGAGCAAGAAAAAGCTGGCAGTTTGTATGTCTGTGGCTGTCCAGGAACAGGCAAATCTTTGTCCATGGACAAAGTGAAAGAGCAGTTGGCTGCTTGGGTAAAGGAGTCAGGTCTTCAGCTGCCAGACACTTTGTCCATAAACTGCGCTTCCTTGGCAAATACGTCTGATATATTCATCAAGATGATGGGTGAAGCACAACCACAGAAGAAAAAGAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTATACTCCCAAAAGGCAGAGTCATCGTGCAAGAAGATGATGAATTGGAATGCGATCGACTTAGCAGATCGCTTTCTTCCAAAACTTCAGGCACTGAATTGCAAACCTCAGGTTGTAACGTATAGGGCTTATTCCAAGGATCAGATCCTCAAGATTCTTCAACAAAGGTTAATTGCATTGCCTTTCGTTGTCTTTCAACCGCAAGCACTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTGATGTTTGCAGGAATGCCATTGAATTGTTAGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGAACTATAATGACGAGAGTGACGCTTCAGCACCTGAGTTTGTCAAAAAACAAGAGCCTCAGATTGGCCCATCCTGCGAGAACTCTATAAATAGGGGGTTCACCACCATTTCAAGGGGTCAGAATTTTGAAGCTCGAGGGCAGAGTCCAGAGCATTCTCCAAGATTCAGATTCAGAGATTCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCATCAGAAGCCGATCATCCAAGAGATCAGCAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCTGA | 1623 | 47.26 | MARLLLPDSKRCRRVSPAAVATQAVATFLPSPSVSPVFQRRPGASFPRFNSGLRDIVSHKFERMPAITRGNHCKIRVTDGSVMESTPPKRKLQQSPVSEPVNKLARRRLLNSSPNRPPHCEGKMFNDDFPKTAKEVLHASTAPTTILCRDDERSRIFNFCKACLEQEKAGSLYVCGCPGTGKSLSMDKVKEQLAAWVKESGLQLPDTLSINCASLANTSDIFIKMMGEAQPQKKKNGSLTPLQHLQRLYSQKAESSCKKMMNWNAIDLADRFLPKLQALNCKPQVVTYRAYSKDQILKILQQRLIALPFVVFQPQALELCARKVAAVSGDMRKALDVCRNAIELLEVELKASSKELNYNDESDASAPEFVKKQEPQIGPSCENSINRGFTTISRGQNFEARGQSPEHSPRFRFRDSESREFCQSPESSEADHPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKINKPTDRTDHQANRPIQEIIKSAG | 540 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 32647259 | 32654173 | + | Lag0016058.1 | Lac12g1686 | 590283 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac12g1686 | 540 | Pfam | Cdc6/ORC-like, ATPase lid domain | 291 | 348 | IPR054425 | - | |
Lac12g1686 | 540 | Gene3D | - | 127 | 277 | IPR027417 | - | |
Lac12g1686 | 540 | PANTHER | CELL DIVISION CONTROL PROTEIN 6-RELATED | 84 | 254 | IPR050311 | GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER) | |
Lac12g1686 | 540 | MobiDBLite | consensus disorder prediction | 81 | 101 | - | - | |
Lac12g1686 | 540 | Pfam | AAA domain | 168 | 253 | IPR049945 | GO:0016887(InterPro) | |
Lac12g1686 | 540 | MobiDBLite | consensus disorder prediction | 451 | 476 | - | - | |
Lac12g1686 | 540 | MobiDBLite | consensus disorder prediction | 405 | 441 | - | - | |
Lac12g1686 | 540 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 135 | 348 | IPR027417 | - | |
Lac12g1686 | 540 | MobiDBLite | consensus disorder prediction | 396 | 540 | - | - | |
Lac12g1686 | 540 | MobiDBLite | consensus disorder prediction | 477 | 530 | - | - | |
Lac12g1686 | 540 | Coils | Coil | 335 | 355 | - | - | |
Lac12g1686 | 540 | Gene3D | - | 278 | 373 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0841 | Lac-Chr11:8996838 | Lac12g1686 | Lac-Chr12:32647259 | 4.00E-08 | dispersed | |
Lac12g1686 | Lac-Chr12:32647259 | Lac2g2564 | Lac-Chr2:38714328 | 4.20E-13 | dispersed | |
Lac9g2413 | Lac-Chr9:43218926 | Lac12g1686 | Lac-Chr12:32647259 | 4.20E-52 | transposed | |
Lac12g1686 | Lac-Chr12:32647259 | Lac7g1704 | Lac-Chr7:21413974 | 2.60E-10 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac12g1686 | K02213 | - | csv:101205741 | 418.313 |