Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g1923 ATGGCCGGCGGAGGTGAAGGAACCACGCTGGAATTCACTCCGACGTGGATTGTCGCCGCCGTCTGCACCGTCATCGTCGCCATTTCCCTCGCCTTAGAGCGCCTCCTCCACTTCCTCGGCAAATACCTCAAGAGCAAGAATCAGAAGCCGCTAAATGAAGCTCTACAGAAAGTTAAAGAAGAATTGATGCTTATGGGGTTTATTTCACTTCTGCTCACTGTATTTCAAGGCGCTATCTCTAAATTGTGTGTTTCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAGGATAAACCTAAAGCTGAAAACGATTCGCCTTCCGGTGAAGCTGGTTCATCGACGACGAAGCATTTTCAGACGTTCTTTGTTTCGAGTATTTCTGGTACGGCTAGGCGCCTTCTTGCTGAGGGATCGGCTTCACAGAATGGTTATTGTGCTCAAAAGCACAAGAAACAGAAGAAGAAAAGATTGCGAACTGGTCCTGAAGTGTTCACTTCAAAGAATGATTTGCATTTGGAAATAAATTCGTCAGTGGAAGCATTGGAGGATTCTATTGCGAAAGAGAATTATGATACCGAACACGTTCTAAAACCAAAAGTCACCGACGTCCATCAACATGCTTTTATCAAAGATCACTTTTTGGGCATTGGGAAAGATTCAGTGCTTCTTGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAATCAGATTATGCAACATTACGGCTTGGTTTCATTATGACACACTGCAGGGGAAACCCAAAGTTTAATTTTCACAAGTACATGATACGAGCCCTTGAAGATGATTTCAAGCATGTTGTCGGTATCAGTTGGTATCTTTGGATCTTCGTGGTTGTCTTCTTGTTCCTTAATGTTAATGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTTGCTGTGGGAACGAAGCTGGAACATATTATAACCCAGCTGGCTCATGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGTGATCTAGTAGTCCAACCATCCGACGATCACTTTTGGTTTCAGCGACCCCGTATTGTTCTCTTCTTGATCCACTTCATACTTTTCCAAAACGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTCGACTCGTGCATCATGGGACAAGTCCGCTATATCATTCCAAGGCTCATTATTGGGGTGTTTGTTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATAGTCACACAGATGGGAAGCTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGCTGGGCTCAGAAGGTGAAGAAAAGAAAGGGACTGAGAGCCGCCGCTGATGGCTCCAGCCAAGGAAGCAAGGAAGGTGGTTCTACTGTGGGGATTCAGCTGGGAAATGTTATGCGCAAGGCTTCTGCACCAAGTGAAATTAAGCCTGATGATTCCAAATCAAATGATTTGCCTTAG 1512 44.25 MAGGGEGTTLEFTPTWIVAAVCTVIVAISLALERLLHFLGKYLKSKNQKPLNEALQKVKEELMLMGFISLLLTVFQGAISKLCVSESLTEHLLPCDLKDKPKAENDSPSGEAGSSTTKHFQTFFVSSISGTARRLLAEGSASQNGYCAQKHKKQKKKRLRTGPEVFTSKNDLHLEINSSVEALEDSIAKENYDTEHVLKPKVTDVHQHAFIKDHFLGIGKDSVLLGWLHSFLKQFYASVTKSDYATLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVNGWHTYFWIAFIPFVLLLAVGTKLEHIITQLAHEVAEKHVAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADGSSQGSKEGGSTVGIQLGNVMRKASAPSEIKPDDSKSNDLP 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35968021 35973723 + Lag0016295.1 Lac12g1923 590520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g1923 503 PANTHER MLO-LIKE PROTEIN 1 179 472 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac12g1923 503 MobiDBLite consensus disorder prediction 484 503 - -
Lac12g1923 503 MobiDBLite consensus disorder prediction 489 503 - -
Lac12g1923 503 Pfam Mlo family 8 152 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac12g1923 503 Pfam Mlo family 183 472 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac12g1923 503 MobiDBLite consensus disorder prediction 97 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1923 Lac-Chr12:35968021 Lac7g2556 Lac-Chr7:43781979 1.80E-82 dispersed
Lac12g1923 Lac-Chr12:35968021 Lac9g2570 Lac-Chr9:44311303 1.30E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g1923 K08472 - csv:101211868 859.751