Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac12g1938 ATGAAAATAAAGCACAGAAAAGCTCCAAAATTTTCCCTTCTACCCATCAGAAAACAGAGAAGGATGATGAACCAACCTGGAAAATGGGTGGCGCTGGTGGCGGCGATATGGATTCAGGCATTTGCAGGCACAAATTTTGATTTCCCCTCCTATTCGTCCGATCTGAAGGCGGCTCTGGGGATGTCGCAGGTGGAGCTCAATTATCTCGCAGTGGCTTCCGACGTCGGCAAGGCCTTTGGATGGTGCTCCGGCGTTGCTCTATTGTATTTTCCTTTGTGGGTGGTGATGATCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTTCAATGGCTTCTCCTTCAAAGGATTGTCTCTCTGCCTTACTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGCTGGTTCAATACGGTCTGCTATGTCTCGTGCATCCAAAATTTTCCAGCCAACCGCGCGCTTGCACTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTATACACGCTAATTGCCAATGCAGTAGACCCAAATGATGCCAGCTTGTACCTTTTCCTAAATGCAGTGGTTCCTCTCATCATCTCTGTCGTTGCTCTCCCCCCAATCCTTCATCAGCCACCGGTTCAGCCGTCCTCTGCCGATGCCACCCGCCATGACCCCCTCATCTTCATCTGCTTATACATCACGGCAGTTATCACGGGCCTGTATCTAATCACCTTCAATTCCATGCCTTCCTACAAATACGGGTCCCAAATTCTGTTGGCAGGGGCCTTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAATTCTGAGTACTCGCAGGAGGTTGTTTCGGATGGTATCCACCAGCTTGAGCTGTCTTATTCACTCTAGATTCGACATTGTCGATCATGAGCTTCAACAGGAGCTCATCACTGTTGGAACAGAAAGAAGTGGCACGAAAGTCATCATCCCTTTTGATTCTAAAGAGAAGGAAATCATTTCATGTAAGGTGATGGAGAAAGAGAATTTGGCAGTGCTTGATGAAGAGCATTCGGCTAAGATGCTCATGCGACGGTTGGACTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGGACAATTGGGTTGGTTTATAGCAACAATCTTGGGCAGATCTCACAGTCGCTAGGATACAGTTCGTTGACAAGTTCCCTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCAGCCCCAGATTTCATGCGTGAAAAGGTGCCGTTTGCCAGAACAGGGTGGCTAGCCATTGCACTAGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCAAGATCGCATTACAAGCCGGCACTGGCTTGATCGGGCTAAGCTCGGGATTCATATTCTCAGCCTCGGTCTCAATCACATCAGAGTTATTCGGACCGAACAGCTCAGGGGTCAACCACAACATCCTCATCACAAACATCCCCCTCGGCTCGTTCCTCTACGGCGTCTTGGCGGCGGTGGCCTACGATTCAAGCGCTGGAAGTTCACACCAGACGGCGGCGCTGGGGGACGCGGTGGTATGCATCGGCCGGAAATGCTATCTGCAGACGTTCATATGGTGGGCTTGCATCTCCATCGTCGGCCTCGCTTCTAGCTTCTTGCTTTTCCGACGGACGAAGCCGGCTTACGACCGCCATTGCGAGAGTATCCTAATCAAGACACCGCCATTTTAG 1740 49.83 MKIKHRKAPKFSLLPIRKQRRMMNQPGKWVALVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVELNYLAVASDVGKAFGWCSGVALLYFPLWVVMIMAASMGFLGYGLQWLLLQRIVSLPYSMVYLLCLLAGCSICWFNTVCYVSCIQNFPANRALALSLIVSFNGVSAALYTLIANAVDPNDASLYLFLNAVVPLIISVVALPPILHQPPVQPSSADATRHDPLIFICLYITAVITGLYLITFNSMPSYKYGSQILLAGAFALLLVPLCLPGILSTRRRLFRMVSTSLSCLIHSRFDIVDHELQQELITVGTERSGTKVIIPFDSKEKEIISCKVMEKENLAVLDEEHSAKMLMRRLDFWLYYVAYFCGGTIGLVYSNNLGQISQSLGYSSLTSSLVTLYSSCSFFGRLISAAPDFMREKVPFARTGWLAIALVPTPIAFILLAASGSKIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVAYDSSAGSSHQTAALGDAVVCIGRKCYLQTFIWWACISIVGLASSFLLFRRTKPAYDRHCESILIKTPPF 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36116229 36119027 + Lag0016310.1 Lac12g1938 590535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac12g1938 579 SUPERFAMILY MFS general substrate transporter 336 563 IPR036259 -
Lac12g1938 579 SUPERFAMILY MFS general substrate transporter 23 287 IPR036259 -
Lac12g1938 579 Gene3D MFS general substrate transporter like domains 2 206 IPR036259 -
Lac12g1938 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 565 - GO:0016020(PANTHER)
Lac12g1938 579 Gene3D MFS general substrate transporter like domains 334 553 IPR036259 -
Lac12g1938 579 Pfam Nodulin-like 28 273 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1938 Lac-Chr12:36116229 Lac5g2282 Lac-Chr5:41486532 1.50E-170 dispersed
Lac12g1938 Lac-Chr12:36116229 Lac9g1811 Lac-Chr9:37862325 9.90E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac12g1938 - - - 0.0