Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0083 ATGGAAGCAGAGATCGGAGAAGAGTTCAAGAGGAGTGGTTTCACCTTCGATGAAGAGGAAGAGATTCTTAAGAAATGTCTTTCGTTTTCTGTTAATTACAACCTAAAGCCTTCAGATATAGTTTCTAGCTGGGAAGTCTACTATCTCAACAGGCAATTAGATGGGTCAATGGTACAAATTGAACAGATGGATGGATTTTTACAACATTTACAGAATGAGCAAGAAGAAGCAGCCGTTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTGAACATGATTTTGAACGATGAGGATGAAGATTCAAAGGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGATCGATTTGATTTGACACCTTACACAAATGAAGGCTTGTTCTCTTCGGGAAAGCCTTCAAAGCATATGACACCCTTTGGGCAAAGAACAGAAAAATTTGGTGTGAGGTTCAGCATTAATAGTGTGCCTGATAAGGAGACTGCTGAAAAGGAAGATAATTGCGAGAATGACGAGGATGCAATCATCAAGAAGGTTCGACCGCTGCAAGGATGCTCCTTGACAGTCCATGGATCAGGGTTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAGGGTTGAAGATAGGTTTAATTCTCTTGATAACCGAATCATGAAGCATGCTGAAGCTTTTGCTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCTACAGTTGCTTCGCAGAAAAGCATGTTTGCAGTAGGCATGATTTGGTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTGTTGAGCATTCGGGGGGGCAGCAAGTTCGTCTAGAATTACAAAACTTAAGCCAGTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGTCACTGCTTGGTTGCATCCAAACTTATAGATTCTTTTCCTGTATCTTCCACTGTTGACCCCATTCTGCCTCCTGCAAAGAAGATAGCTTTGAACCATGATATCCAGCCAATTAATCAATCTTCTACACAGTCAGAATTATCGATGATTATTGCGTCAGGCCCCTATACTACAACAGACAACTTATTGTTTGAGCCTTTGACAGAGTTACTAGCATATGCAAAAAGGAAGCTTCCTCAGCTATTAATATTGCTTGGGCCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTCTCAGAAGGGTGCAAGATTATGCAGAACACATGGGCCCTGATGCACGTGTACTGTTGATACCATCTATAAGGGATGCCAATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCTCAAACCCAGGCATCTTGGAAGCAAATCAGGCAAAGATTGCTTGCTGTACCGTGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACAAAGGGAACAGCCAACGACCGCCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGCAGCTTTTATCCTCTATATCCTCCAGCCGAAGGAGTTCCACTGGACTTTTCACTTGCCCCAAAAGCTCTCGACATCTCTGTAATACCCGATATTCTCATCCTTCCGTCCGACATGAAACCCTTCGTGAAGGTTATTTCCCTTGGTGAAGGAGGCTCGGAGGAAGAGCGAGCGAGCTGCGTATGTGTGAATCCAGGAAGACTGGCCAAAGGTGAAAGAGGAGGTACTTTTGTAGAACTTAATTACTTTGGTAGGCCTGACCAGATAAATGCTGCAGTTGTCAGCATATGA 1869 43.18 MEAEIGEEFKRSGFTFDEEEEILKKCLSFSVNYNLKPSDIVSSWEVYYLNRQLDGSMVQIEQMDGFLQHLQNEQEEAAVKGEPDLHVYSSKDVNMILNDEDEDSKEDILKTPNGKSQSLHKDRFDLTPYTNEGLFSSGKPSKHMTPFGQRTEKFGVRFSINSVPDKETAEKEDNCENDEDAIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDRVEDRFNSLDNRIMKHAEAFAASGLYEEAVDPTVASQKSMFAVGMIWCDGEGHLNDKSTLLQSSVEHSGGQQVRLELQNLSQFSIFPGQVVGIEGHNPSGHCLVASKLIDSFPVSSTVDPILPPAKKIALNHDIQPINQSSTQSELSMIIASGPYTTTDNLLFEPLTELLAYAKRKLPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLIPSIRDANHDFVFPQPAFDIPSDLRLQISSLSNPGILEANQAKIACCTVDILRHLSGEELSRNLTKGTANDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPKALDISVIPDILILPSDMKPFVKVISLGEGGSEEERASCVCVNPGRLAKGERGGTFVELNYFGRPDQINAAVVSI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 609191 614779 - Lag0039879.1 Lac13g0083 591239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0083 622 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 3 608 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
Lac13g0083 622 FunFam DNA polymerase alpha subunit B 341 505 - -
Lac13g0083 622 Pfam DNA polymerase alpha subunit B N-terminal 4 52 IPR013627 -
Lac13g0083 622 PIRSF DNA_pol_alpha_2 1 614 IPR016722 -
Lac13g0083 622 Gene3D - 1 77 IPR043034 -
Lac13g0083 622 Gene3D - 339 512 - -
Lac13g0083 622 Gene3D - 513 618 - -
Lac13g0083 622 MobiDBLite consensus disorder prediction 100 121 - -
Lac13g0083 622 Pfam DNA polymerase alpha/epsilon subunit B 361 570 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Lac13g0083 622 Pfam DNA polymerase alpha subunit B, OB domain 239 322 IPR054300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0083 K02321 - csv:101206268 1124.38