Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0122 | ATGGCTCTGCTTCATCTCTCTCCATGGCTTCTCCTCATCTTTTTCTCTCTACTACTCTTCATCCTAAAAATGAAGAGAACTTCAAATAGAAAAAAGGGTCGTCTTCCTCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAAATTGGGAAGCTCCCTCACAGATCCCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTCAACCTCGGCGGCATCCAAACCATCGTCATATCCTCAGCCGACGCCGCCCGTGCCCTCTTGAAAACCCACGATCTTCAAAGCTGCAGCAGACCACAGACTGAAAATGTCAAGAAACTCACTCACAACTTCCTCGACATTGTATTTTCGCCTTATGGTGATTACTGGCGAGAGATGCGCAAGATTTGTGTGCTCGAGCTTTTCAGTGTGAAGAGGGTGAAATCTTATGAACCCATTAGAGAACAGGAAGTTGCTTCGCTTGTCCAATCAATTTCAGAATTGGCTTCGACAGGAAGTGTTGTTGATCTTAGTGAGAAGTCCATCGCTCTCACTGCTGGTGTTATTTTCAGAATTGCTTTTGGGAAGAAGTTTGAAGGGTATGGATTTCATGAGCTTGTGAGTGAGGCTGAGGCCTTGTTGGGAAGCTACAGTGCTTCTGAGCTTTTTCCTGTTCCATTTGTGGGGAAGGTCATTGATTGGCTGAGTGGAAGAAAAACTAAACTTGAGAAGGTTTTTAATGAGTTGAATGCTTTGTTTCAAGAGGTGATTGATGAACATCTTTGCCCTGAGAGAGCTAAGCAAGAGCAAGATGATATTATTGATGTGCTTTTGGAAATCAACAAAAAGAGAGTTGAGCCTTGTGTTGTTGCCATTGCTCATGAAAATATCAAAGCCATTCTTTTGAACATATTTTTGGCAGGATTAGACACTAGTTCCATTACAATAGTATGGGCAATGGCAGAGCTTGCTAAGAAACCAAAGATGATGAAGAAAGCGCAGGAAGAAATCAGAAACTATATAGGAAATAGAGAAAAGATAACAGAGAATGACACAGAAGAGCTTCCATATTTGAAAATGATAGTGAAAGAGACATTGAGACTGCATCCACCAGCACCCCTTCTTATTCCAAGAGAAATCATGTCTCATTTCAAAATTGAAGGCTACGATTTTTACCCCAAAACAATAGTTCAAGTGAACGCATGGGCAATGGGACGAGACCACAAATGTTGGATAGACCCCGAAGAGTTTATTCCGGAGCGATTTGCAGAGAGCTTTGTTGATTACAAAGGACAACATTTTGAGTTCTTGCCATTTGGGGCTGGTCGAAGGATTTGCCCCGGGTTGAATATGGGGGTGAAGACCGTGGAGTTTGCTTTGGCAAATCTTTTGTATCATTTTGATTGGAAGTTGCCAAAGGGGATGAAGGAGGAAGATTTGGACATGGAAGAAACGTCAGGTTTTAGCCTCACCATCTACAAGAAGTTGCCTCTCATACTTGTGCCAATCTCATACCATCCATGA | 1515 | 43.1 | MALLHLSPWLLLIFFSLLLFILKMKRTSNRKKGRLPPSPPKLPIIGNLHQIGKLPHRSLWRLSQLYGPIISLNLGGIQTIVISSADAARALLKTHDLQSCSRPQTENVKKLTHNFLDIVFSPYGDYWREMRKICVLELFSVKRVKSYEPIREQEVASLVQSISELASTGSVVDLSEKSIALTAGVIFRIAFGKKFEGYGFHELVSEAEALLGSYSASELFPVPFVGKVIDWLSGRKTKLEKVFNELNALFQEVIDEHLCPERAKQEQDDIIDVLLEINKKRVEPCVVAIAHENIKAILLNIFLAGLDTSSITIVWAMAELAKKPKMMKKAQEEIRNYIGNREKITENDTEELPYLKMIVKETLRLHPPAPLLIPREIMSHFKIEGYDFYPKTIVQVNAWAMGRDHKCWIDPEEFIPERFAESFVDYKGQHFEFLPFGAGRRICPGLNMGVKTVEFALANLLYHFDWKLPKGMKEEDLDMEETSGFSLTIYKKLPLILVPISYHP | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 854613 | 856405 | - | Lag0039918.1 | Lac13g0122 | 591278 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0122 | 504 | CDD | CYP71-like | 66 | 495 | - | - | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 500 | IPR050193 | - | |
| Lac13g0122 | 504 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | FunFam | Cytochrome P450 83B1 | 22 | 498 | - | - | |
| Lac13g0122 | 504 | Gene3D | Cytochrome P450 | 20 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | Pfam | Cytochrome P450 | 36 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | SUPERFAMILY | Cytochrome P450 | 36 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0122 | 504 | Coils | Coil | 327 | 347 | - | - | |
| Lac13g0122 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0122 | Lac-Chr13:854613 | Lac13g0124 | Lac-Chr13:875395 | 1.80E-268 | dispersed | |
| Lac13g0122 | Lac-Chr13:854613 | Lac13g0123 | Lac-Chr13:857567 | 5.50E-257 | tandem | |
| Lac10g0502 | Lac-Chr10:3853381 | Lac13g0122 | Lac-Chr13:854613 | 3.70E-104 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0122 | - | - | - | 0.0 |