Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0123 | ATGGCTCTTCTTCATTTCTCTCCATGGCTTCTCCTCTTCTTTTTCTCTCTACTACTCTTCATCATAAAAATGAAAAGAACTTCAAATAGAAAAAAGGGTCGTCTTCCTCCAAGCCCACCAAAGCTTCCAATCATAGGAAACTTGCACCAAATTGGGAAGCTCCCTCACAGATCCCTATGGCGTCTCTCTCAGCTCTACGGCCCCATCATCAGCCTCAACATCGGCAGCATTCGAACCATCGTCGTATCCTCAGCCGACGCCGCCTGCGCCCTCTTGAAAACCCACGATATTCAGAGTTGCTACAGACCACAAACTCAAAATATCAAGAAAATCTCTTACAACTTCTTGGACATTGCCTTTTCACCTTATGGAGATTACTGGCGAAAGATACGCAAGGTTTGTGCGCTCGAGCTTTTCAGTGTGAAGAGGGTGAAATATTATGAACCCATTAGAGAACAGGAAGTTGGTTTGCTTGTGGAATCGATTTCGGAACTGGCTTCGAGTGGAAGTGTTGTTGATCTTAGTGAGAAGACCATTGCTCTCACAGCTTGTGTTACTTTCAGAATTGCTTTTGGGAAGAAGTTAGAAGGGTGTGGATTTCACAAGCTTGTGAGTGAGACTATGGCCTTGTTGGGAAGCTACAGTGCTTCTGAGTATCTTCCTGTTCCATTTGTGGGGAAGGTCATTGATTGGGTTAGTGGAAGAGAAAGTAGAGTTGAGAAGGTTTTTAATGAGTTGAATGCTTTGTTTCAAGAGGTGATTGATGAACATCTTTGTCCTGAGAGAGCTAAGCCAGAGCAAGATGATCTTATTGATGTGCTTTTGGCAATCAACAAAGAGAAAGTCGAGCCTTGCACTGATTCCATTACTCATGAAAATATCAAAGCCATTCTTATGGACATGTTTTTGGCAGGATTAGACACTAGTTCCATTACAATGGTATGGGCAATGGCAGAGCTTGTTAAGACACCAAAGTTGATGAAGAAAGTGCAAGAAGAAATTAGAAATTACATAGGAAACAGAGGAAAAGTAACAGAGAATGACATAGAAGAACTTTCATATCTAAAAATGATAGTGAAAGAGACGTTGAGACTCCATCCACCAGTACCCCTTCTTATTCCAAGAGAAATCATGTCCCATTTCAAAATTGAAGGCTACGATTTTTACCCCAAAACAATGGTTCAAGTGAACGTTTGGGCAATTGGACGAGACCCCAAATGTTGGACGGACCCCGAAGAGTTCATTCCGGAGCGATTTGCAGAGAGTTCTGTTGATTACAAAGGACAACATTTTGAGTTCTTGCCATTTGGGGCTGGTCGAAGGATTTGCCCTGGGTTGAATATGGGGGTAAAGACCGTGGAGTTTGCTTTGGCAAATCTTTTGTATCATTTTGATTGGAAGTTGCCAAAGGGGATGAAGGAGGAAGATTTGGACATGGATGAAACTTCAGGTTTTAGCCTCACTATCAACAAGAAGTTGCCTCTCATACTTGTGCCAATCTCATACCATCCATGA | 1515 | 42.44 | MALLHFSPWLLLFFFSLLLFIIKMKRTSNRKKGRLPPSPPKLPIIGNLHQIGKLPHRSLWRLSQLYGPIISLNIGSIRTIVVSSADAACALLKTHDIQSCYRPQTQNIKKISYNFLDIAFSPYGDYWRKIRKVCALELFSVKRVKYYEPIREQEVGLLVESISELASSGSVVDLSEKTIALTACVTFRIAFGKKLEGCGFHKLVSETMALLGSYSASEYLPVPFVGKVIDWVSGRESRVEKVFNELNALFQEVIDEHLCPERAKPEQDDLIDVLLAINKEKVEPCTDSITHENIKAILMDMFLAGLDTSSITMVWAMAELVKTPKLMKKVQEEIRNYIGNRGKVTENDIEELSYLKMIVKETLRLHPPVPLLIPREIMSHFKIEGYDFYPKTMVQVNVWAIGRDPKCWTDPEEFIPERFAESSVDYKGQHFEFLPFGAGRRICPGLNMGVKTVEFALANLLYHFDWKLPKGMKEEDLDMDETSGFSLTINKKLPLILVPISYHP | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 857567 | 859389 | - | Lag0039919.1 | Lac13g0123 | 591279 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0123 | 504 | CDD | CYP71-like | 66 | 495 | - | - | |
| Lac13g0123 | 504 | Gene3D | Cytochrome P450 | 20 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | Pfam | Cytochrome P450 | 36 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | SUPERFAMILY | Cytochrome P450 | 36 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 500 | IPR050193 | - | |
| Lac13g0123 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0123 | 504 | FunFam | Cytochrome P450 83B1 | 22 | 498 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0517 | Lac-Chr10:3973935 | Lac13g0123 | Lac-Chr13:857567 | 1.30E-57 | dispersed | |
| Lac13g0123 | Lac-Chr13:857567 | Lac13g0151 | Lac-Chr13:1076732 | 2.00E-150 | dispersed | |
| Lac13g0122 | Lac-Chr13:854613 | Lac13g0123 | Lac-Chr13:857567 | 5.50E-257 | tandem | |
| Lac13g0123 | Lac-Chr13:857567 | Lac13g0124 | Lac-Chr13:875395 | 5.10E-263 | tandem | |
| Lac10g2926 | Lac-Chr10:43850544 | Lac13g0123 | Lac-Chr13:857567 | 4.00E-52 | transposed | |
| Lac11g0536 | Lac-Chr11:5520100 | Lac13g0123 | Lac-Chr13:857567 | 1.40E-69 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0123 | - | - | - | 0.0 |