Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0128 ATGGTTTGGACAATGACAGAGCTTGTTAAGAATCCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGACGATGCAACATAAAACAAGATCAAGTGAAGGAGAGCAACCTCGAAAAGCTTCAATATCTAAAAATGGTGGTGAAAGAGGTTCTAAGGCTTCATCCACCAGTCCCACTTCTCCTACCAAGAGAAACCATGTCTCATTTCAAGCTCAATGGTTACGACATTGATCCCAAAGTTCATCTTCATGTGAATGCATGGGCGATCGGACGAGATCCAGAATCTTGGACAAACTCAGAAGAGTTTTTCCCAGAGAGATTTATGGAAAGCAATATCGATTACAAAGGGCAAAATTTCGAGTTAATACCATTCGGAGCTGGTCGAAGAATCTGTCCAGGGATGAATATGGGGATTGTGACAGTGGAGCTAGCACTGGCAAATATGTTGTTGTTCTTTGATTGGAAATTGCCAAACGGAATGAAGGAAGAAGATGTGGACATGGAAGAGGCTGCTGGTATTGCAGTTTCCAAGAAATCGCCTCTTAAGCTTGTTCCAATCCATTACTTTTTTTTTTTTTTTTTTTTGATTACATCAACATTTGGGGGTGAGGAGGTTCGAACCTCTGACCTCATAGTCGATAGTACATGCCAATTACCGCTAAGCTAA 666 40.99 MVWTMTELVKNPKVMKKLQDEIRRCNIKQDQVKESNLEKLQYLKMVVKEVLRLHPPVPLLLPRETMSHFKLNGYDIDPKVHLHVNAWAIGRDPESWTNSEEFFPERFMESNIDYKGQNFELIPFGAGRRICPGMNMGIVTVELALANMLLFFDWKLPNGMKEEDVDMEEAAGIAVSKKSPLKLVPIHYFFFFFFLITSTFGGEEVRTSDLIVDSTCQLPLS 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 907153 907818 + Lag0039924.1 Lac13g0128 591284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0128 221 SUPERFAMILY Cytochrome P450 1 185 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 Coils Coil 15 35 - -
Lac13g0128 221 PRINTS P450 superfamily signature 45 56 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS P450 superfamily signature 131 142 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS P450 superfamily signature 10 23 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS P450 superfamily signature 122 131 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 Gene3D Cytochrome P450 1 184 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 124 133 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac13g0128 221 FunFam Predicted protein 1 183 - -
Lac13g0128 221 PRINTS E-class P450 group I signature 131 154 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS E-class P450 group I signature 121 131 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS E-class P450 group I signature 85 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS E-class P450 group I signature 1 24 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 Pfam Cytochrome P450 2 177 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0128 221 PANTHER CYTOCHROME P450 71B11-RELATED 1 186 IPR050193 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0128 Lac-Chr13:907153 Lac13g0151 Lac-Chr13:1076732 2.90E-85 dispersed
Lac13g0128 Lac-Chr13:907153 Lac13g0129 Lac-Chr13:917944 4.90E-85 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0128 - - - 0.0