Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0129 ATGCTCAGCATTATTTTCATCTTGATTCCTCTAATCTTCCTGCTCTCTTCTCCATTGCTTCTTAAAACAAAGAAGAAGCTTCTTCCTCCAGGCCCTCCAAAGCTTCCATTGTTGGGTCATCTGCACCTCCTTGGCTCTCTTCCCCATCGCTCTCTGTGGAAACTCTCAAAAAAACATGGCCCCATCATGCTTCTCAAATTCGGCGCCGTCCCAACCCTCGTAATCTCCTCAGCCGCCGCTGCAAAAGAGATGTTCAAACTCCACGATCTCGCTTCTTGCAGCCGCCCTCGCTTAGCAGCCACCAGAAGATTTTCGTACAACTTTTTGGACCTAAATTTTTCGCCATACGGCGATCGCTGGAGAGAGCTTCGAAAGATTTGTATCCTCGAGCTCTTCAGCTCCAAACGAGTGCAATCCTTTCAGCATATTAGAGAAGAGGAAGTGGGTCAGCTCTTAAACTCCATTTCTCGATCAACTCTAGTTGAAATGAAGGAGAAATCTTATTCTCTCACTGCGAATATAATGGCCCGGGTTGTTTTTGGCACGAGCTTTAGAGGGAATGAGCTAGATAATGAAAATTTTCACCGAGTTATGCAGAGAGTGAGTGTGGCGTTGGGAAGCTTCTCGGCGACCGACTTCTTTCCCGCTTTCGGTTGGGTTATCGATCGGCTCAATGGTGTTCATGGGAGGCTGGAGAAAAGCTTTGCTGAATTGGATGCTTTCTTCCAACGTGTGGTTGATGATCGCATAAAGTTTGGAGCAATAACTTCTAAGAGTGAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAGAGACTGCTCTGAATCTGATGGTCTGCAACTTACTAAAAATTGCATCAAGGCACTTATCATGGACGTATTTTTAGCTGGAGTGGAGTCAGGAGCAGGGACCATTCTCTGGGCAATGTCGGAATTGATTAAGAATCCAAGAGTGATGAAGAAGCTACAATACGAGATCAGAAGCTGCATAAAAGAAGATCAAGTAAAGGAGAGCGATCTCAAAAAGCTTGAATATCTAAAAATGGTTGTGAAAGAGGTTCTAAGGTTGCATGCGCCCGCTCCACTTCTCCTTCCAAGAGAAACCATGTCTCATTTCAAGCTAAGTGGTTACGATATTGACCCCAAAACTCATGTCCATGTCAATATATGGGCGATTGGACGAGATCCAAATTCTTGGACTAACCCAGAAGAATTCTTGCCCGAGAGATTCATAGGAAGCAATATCGACTACAGAGGGCAGAATTTCGAGTTGTTACCATTTGGAGCTGGTCGAAGAATTTGTCCTGGTATGAACATGGGGATCGTTACTGTGGAGCTGGCATTGGCGAATCTATTGTTGTGTTTTGATTGGAAATTGCCGTATGGAATGAAAGAAGAAGATGTTGACATGGAAGAGGATGTTGGTGTAACAGCTACAAAGAAAACACTTCTTAAACTTGTTCCAATCCGCCGCCTTTAA 1482 44.13 MLSIIFILIPLIFLLSSPLLLKTKKKLLPPGPPKLPLLGHLHLLGSLPHRSLWKLSKKHGPIMLLKFGAVPTLVISSAAAAKEMFKLHDLASCSRPRLAATRRFSYNFLDLNFSPYGDRWRELRKICILELFSSKRVQSFQHIREEEVGQLLNSISRSTLVEMKEKSYSLTANIMARVVFGTSFRGNELDNENFHRVMQRVSVALGSFSATDFFPAFGWVIDRLNGVHGRLEKSFAELDAFFQRVVDDRIKFGAITSKSEENIVDVLLKMERDCSESDGLQLTKNCIKALIMDVFLAGVESGAGTILWAMSELIKNPRVMKKLQYEIRSCIKEDQVKESDLKKLEYLKMVVKEVLRLHAPAPLLLPRETMSHFKLSGYDIDPKTHVHVNIWAIGRDPNSWTNPEEFLPERFIGSNIDYRGQNFELLPFGAGRRICPGMNMGIVTVELALANLLLCFDWKLPYGMKEEDVDMEEDVGVTATKKTLLKLVPIRRL 493
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 917944 921274 + Lag0039925.1 Lac13g0129 591285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0129 493 SUPERFAMILY Cytochrome P450 29 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 CDD CYP71-like 58 485 - -
Lac13g0129 493 PANTHER CYTOCHROME P450 71B11-RELATED 7 490 IPR050193 -
Lac13g0129 493 FunFam Cytochrome P450 83B1 16 488 - -
Lac13g0129 493 Gene3D Cytochrome P450 21 490 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac13g0129 493 Pfam Cytochrome P450 29 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac13g0129 493 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0129 Lac-Chr13:917944 Lac13g0151 Lac-Chr13:1076732 2.40E-217 dispersed
Lac13g0127 Lac-Chr13:904764 Lac13g0129 Lac-Chr13:917944 4.70E-27 proximal
Lac13g0128 Lac-Chr13:907153 Lac13g0129 Lac-Chr13:917944 4.90E-85 tandem
Lac13g0129 Lac-Chr13:917944 Lac13g0130 Lac-Chr13:921857 2.10E-200 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0129 - - - 0.0