Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0151 | ATGGCCCACTTGGCTGGAAATTTTGGCTTTGATCTTGACCTACTGGTTGTGGGAGCAACATCCTGCTTGACATTAGTGGCTTTGTTGCTCACGTATCATTGTTGTCCGAGAAATTCGAGGAATGGTCCGGTTTCAGCGCACTGCAAAATCTTAGAATTTGGAAGTGATGCTCTGTTTCTATTCCTGTTCTTGGAAGATAAACAGTCTGATATAACTGATATATTTGTAGCTGGAGTGATCACCAGAGCAAAAACCATTGTTTGGGACATGGTAGAGCTGGTTAGGAATCCAAGAGTGATGAAGAAGCTGCATAAAAGGTTGTCCTTGATCTGGTTTAACCTTTCTGAACCCACCTTTCTGGCTGCTCCTCATCAACATGAAGTTTCTATCTCTGTAGACCTCGGCAGTTCCAGCCTGATCATCAACCAAATCACTAAAATTCCCAACAAAACCATAGTGCTTAACCTTGATCAAATGATACATAGCCTTTCCATCTGGGTTTCTCTGCTCTTGCTGTTGTCTTTCCTACTGCTGCTGCTTAAAACGAAGACACAGAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTTTGTTGGGCCATTTGCACCTCATTGGCTCGCTCCCCCATCGCTCTTTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTCAAACTTGGCTCTGTCCCAACCATCGTAATCTCCTCTGCTGCTGCAGCCAGAGAGGTTTTACAAGTGCATGATCTTGCTTGTTGCAGCCGTCCTCGCTTAGCCGCTAGTGCAAGATTTTCATACAACTTTTTAGACATAGGTTTATCTCCATATAGTGATCATTGGAGGGAAGTTCGGAAGATTTGTGTTCTTGAGCTCTTCAGTGCTCAGTGGGTGCAATCGTTTCAATTGATCAGAGAAGAAGAGGTAGCTCTGCTGTTAAAGTCAATCTCTCAATCTTCATCCCTTGCAATTCCAGTCGATCTGAGTGAGGAATCACATACTCTCACTGCAAATATAACAACACGAATAGCTTTTGGGAAGAGCTTTAGAGGGGGTGAACTAGATAATGGAAATTTTCACAAGGTTATCCGTAGAGCAATAGCAGCATTGGGAAGCTTCTCAGTGACTGACTTCTTTCCTACTGTGGGTTGGATTATTGATCGGCTCAGTGGTGTTCATGGGAGACTGGAGAAGAGCTTTGCTGAGTTAGATTCTTTTCTCCAACAAGTAATCGACGACCGCATCAACTTTAGGGCGACTTCTCAAAATGAAGAAAATATTGTTGATGTTTTGTTGAAAATGGAGAGAGATCGCTCTGACCTCGATGGCCTACAACTCACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGGGCAGGCACCATTATTTGGGCCATGGCAGAGCTAGTTAAGAATCCACAAGTGATGAAAAAGTTACAGGATGAGATCAGAAGCTGCATAAAAGAAGATCAAGTGAAGGAGAATGACCTTGAAAAACTTGAGTATCTAAAATTGGTGGTGAAAGAGGTTCTAAGGTTGCGTGCACCTGCCCCACTTTTACTTCCAAGAGAAACCGTGTCCCATTTCAAGCTCAAGGGTTATGATATTGAACCTAGAGCTCATCTTCATGTTAATGTATGGGCGATTGGGCGAGATCCAAATTATTGGACTAATCCAGAAGAATTTTTTCCTGAGAGATTTGTGGGAAGCAATATTGATTATAAAGGGCAGAATTTTGAGTTATTACCATTTGGAGCTGGTAGGAGAATTTGTCCTGGTATGAACATGGGGATTGTTACCATGGAGCTGACATTGGCTAATTTGTTGCTCCATTTTAATTGGAAATTGCCATATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGTTGGTCTGACTGTTGCAAAGAAATCACCTCTAAAACTTGTTCCAATTGGCTATAGAGCAAGGTTCATGGCTTCTCGAGATATGATGATTGCCTTGATACAACCTTTGGAGTTGTTCGACATCCAAATTTCATATTCATCTTTCTTCTTTTTAAATATAGCAAATCAGCTATCCTTTCATGAGATTACAAATTCTTATTAG | 2115 | 41.94 | MAHLAGNFGFDLDLLVVGATSCLTLVALLLTYHCCPRNSRNGPVSAHCKILEFGSDALFLFLFLEDKQSDITDIFVAGVITRAKTIVWDMVELVRNPRVMKKLHKRLSLIWFNLSEPTFLAAPHQHEVSISVDLGSSSLIINQITKIPNKTIVLNLDQMIHSLSIWVSLLLLLSFLLLLLKTKTQNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLKLGSVPTIVISSAAAAREVLQVHDLACCSRPRLAASARFSYNFLDIGLSPYSDHWREVRKICVLELFSAQWVQSFQLIREEEVALLLKSISQSSSLAIPVDLSEESHTLTANITTRIAFGKSFRGGELDNGNFHKVIRRAIAALGSFSVTDFFPTVGWIIDRLSGVHGRLEKSFAELDSFLQQVIDDRINFRATSQNEENIVDVLLKMERDRSDLDGLQLTRDCIKAIIMDIFIAGVNPGAGTIIWAMAELVKNPQVMKKLQDEIRSCIKEDQVKENDLEKLEYLKLVVKEVLRLRAPAPLLLPRETVSHFKLKGYDIEPRAHLHVNVWAIGRDPNYWTNPEEFFPERFVGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELTLANLLLHFNWKLPYGMKEEDMDMEEDVGLTVAKKSPLKLVPIGYRARFMASRDMMIALIQPLELFDIQISYSSFFFLNIANQLSFHEITNSY | 704 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 1076732 | 1081716 | - | Lag0039947.1 | Lac13g0151 | 591307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 335 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 512 | 530 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 599 | 622 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 241 | 262 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 470 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 589 | 599 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 217 | 236 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 450 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | E-class P450 group I signature | 553 | 577 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | Pfam | Cytochrome P450 | 190 | 642 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | Gene3D | Cytochrome P450 | 177 | 653 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PANTHER | CYTOCHROME P450 71B11-RELATED | 167 | 654 | IPR050193 | - | |
| Lac13g0151 | 704 | PRINTS | P450 superfamily signature | 513 | 524 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | P450 superfamily signature | 77 | 94 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | PRINTS | P450 superfamily signature | 590 | 599 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | SUPERFAMILY | Cytochrome P450 | 190 | 653 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | CDD | CYP71-like | 219 | 649 | - | - | |
| Lac13g0151 | 704 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 592 | 601 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac13g0151 | 704 | SUPERFAMILY | Cytochrome P450 | 68 | 117 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac13g0151 | 704 | FunFam | Cytochrome P450 83B1 | 177 | 652 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0123 | Lac-Chr13:857567 | Lac13g0151 | Lac-Chr13:1076732 | 2.00E-150 | dispersed | |
| Lac13g0124 | Lac-Chr13:875395 | Lac13g0151 | Lac-Chr13:1076732 | 3.10E-151 | dispersed | |
| Lac13g0125 | Lac-Chr13:881206 | Lac13g0151 | Lac-Chr13:1076732 | 2.30E-218 | dispersed | |
| Lac13g0127 | Lac-Chr13:904764 | Lac13g0151 | Lac-Chr13:1076732 | 5.70E-25 | dispersed | |
| Lac13g0128 | Lac-Chr13:907153 | Lac13g0151 | Lac-Chr13:1076732 | 2.90E-85 | dispersed | |
| Lac13g0129 | Lac-Chr13:917944 | Lac13g0151 | Lac-Chr13:1076732 | 2.40E-217 | dispersed | |
| Lac13g0130 | Lac-Chr13:921857 | Lac13g0151 | Lac-Chr13:1076732 | 5.20E-207 | dispersed | |
| Lac13g0151 | Lac-Chr13:1076732 | Lac10g0502 | Lac-Chr10:3853381 | 2.00E-111 | dispersed | |
| Lac11g0531 | Lac-Chr11:5494181 | Lac13g0151 | Lac-Chr13:1076732 | 7.50E-45 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0151 | - | - | - | 0.0 |