Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac13g0183 | ATGGAAGAAATGTACGGCTTGCAATCCACCGCCGAATATTCGGATAACGCCTTGATGTCGCCGGAGAATCTGATTCTTCAGTCCGATTATCAGAGCCTTCTGGTCACATCCGGAGAGTTTCGCGATCGGATTCCGGTCTTTGGATCCAACGAATTGCTCTCGGCGGCGGCGTCCGCGATATCGGAGGCCGAAGCGGCATCGATCGCTCCGGAAATTCAACGTGAAGAAGATGTGGTGAACGTGATCAAAGCCAAGATTTCGTCTCATCCTATTTATCCTCGTTTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGGGCGCCTCCGGAGATTGCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACCTTTGTAACCGTCACGCTGTCACCACGTGCTTAGGCGTCGATCCTGAGCTCGATGAATTCATGGAAACGTACTGCGATATGCTGGTGAAGTATAAATCAGATCTCAAAAGGCCTTTCGATGAAGCAACCACGTTCTTGAATAAGATCGAAATGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCTGTCGCTGTTTTTGGATTATGA | 588 | 49.15 | MEEMYGLQSTAEYSDNALMSPENLILQSDYQSLLVTSGEFRDRIPVFGSNELLSAAASAISEAEAASIAPEIQREEDVVNVIKAKISSHPIYPRLLDAYIDCQKVGAPPEIAHLLEGIRQESDLCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIEMQLSNLCNGAFSRSLSVAVFGL | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1279830 | 1281457 | - | Lag0039979.1 | Lac13g0183 | 591339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac13g0183 | 195 | SMART | KNOX1_2 | 80 | 124 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lac13g0183 | 195 | Pfam | KNOX1 domain | 82 | 123 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lac13g0183 | 195 | SMART | KNOX2_2 | 130 | 181 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lac13g0183 | 195 | PANTHER | FUSED COMPOUND LEAF 1 | 73 | 181 | - | - | |
Lac13g0183 | 195 | Pfam | KNOX2 domain | 134 | 180 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g0183 | Lac-Chr13:1279830 | Lac6g2534 | Lac-Chr6:43116099 | 5.80E-29 | dispersed | |
Lac3g0716 | Lac-Chr3:5654134 | Lac13g0183 | Lac-Chr13:1279830 | 5.70E-44 | transposed | |
Lac13g0183 | Lac-Chr13:1279830 | Lac6g1299 | Lac-Chr6:13067718 | 5.20E-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac13g0183 | - | - | - | 0.0 |