Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0183 ATGGAAGAAATGTACGGCTTGCAATCCACCGCCGAATATTCGGATAACGCCTTGATGTCGCCGGAGAATCTGATTCTTCAGTCCGATTATCAGAGCCTTCTGGTCACATCCGGAGAGTTTCGCGATCGGATTCCGGTCTTTGGATCCAACGAATTGCTCTCGGCGGCGGCGTCCGCGATATCGGAGGCCGAAGCGGCATCGATCGCTCCGGAAATTCAACGTGAAGAAGATGTGGTGAACGTGATCAAAGCCAAGATTTCGTCTCATCCTATTTATCCTCGTTTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGGGCGCCTCCGGAGATTGCACATTTGTTAGAGGGAATCCGTCAAGAAAGCGACCTTTGTAACCGTCACGCTGTCACCACGTGCTTAGGCGTCGATCCTGAGCTCGATGAATTCATGGAAACGTACTGCGATATGCTGGTGAAGTATAAATCAGATCTCAAAAGGCCTTTCGATGAAGCAACCACGTTCTTGAATAAGATCGAAATGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCTGTCGCTGTTTTTGGATTATGA 588 49.15 MEEMYGLQSTAEYSDNALMSPENLILQSDYQSLLVTSGEFRDRIPVFGSNELLSAAASAISEAEAASIAPEIQREEDVVNVIKAKISSHPIYPRLLDAYIDCQKVGAPPEIAHLLEGIRQESDLCNRHAVTTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIEMQLSNLCNGAFSRSLSVAVFGL 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1279830 1281457 - Lag0039979.1 Lac13g0183 591339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0183 195 SMART KNOX1_2 80 124 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac13g0183 195 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac13g0183 195 SMART KNOX2_2 130 181 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Lac13g0183 195 PANTHER FUSED COMPOUND LEAF 1 73 181 - -
Lac13g0183 195 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0183 Lac-Chr13:1279830 Lac6g2534 Lac-Chr6:43116099 5.80E-29 dispersed
Lac3g0716 Lac-Chr3:5654134 Lac13g0183 Lac-Chr13:1279830 5.70E-44 transposed
Lac13g0183 Lac-Chr13:1279830 Lac6g1299 Lac-Chr6:13067718 5.20E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0183 - - - 0.0