Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0369 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTCGCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTTGCTAAACTAGATGTTGAGCTAACCGTGGAGGAGAGGAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGAGCTTCTTGGCGTATCATGTCCTCAATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAGAGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAACCTCGGCAGAAGCATCGGTTTTCTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAAAGAAAGGAGGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCTTCGAGCACCGCAAATACCGAACTCCCATCCACCCACCCGATCCGTCTTGGCCTTGCTCTCAACTTTTCTGTCTTTTACTATGAGATTATGAATTCTCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTTATAATGCAGTTGCTGAGAGACAATCTCACCCTCTGGACATCTGATTTGCCCGAAGATGGAGGTGAAGAGAACTTCAAAGGTGAGGATTCCAAACCGGCAGCAGCACCAGCCCCCGAGCAGCAGCAGCAGCACTAA 804 46.39 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICTDILTIIDKHLIPSSTSAEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKGEDSKPAAAPAPEQQQQH 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2618890 2621039 + Lag0040165.1 Lac13g0369 591525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0369 267 Coils Coil 14 34 - -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Lac13g0369 267 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Lac13g0369 267 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Lac13g0369 267 SMART 1433_4 8 249 IPR023410 -
Lac13g0369 267 MobiDBLite consensus disorder prediction 238 267 - -
Lac13g0369 267 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Lac13g0369 267 PIRSF 14-3-3 2 248 IPR000308 -
Lac13g0369 267 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Lac13g0369 267 Gene3D - 1 249 IPR036815 -
Lac13g0369 267 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Lac13g0369 267 FunFam 14-3-3 protein epsilon 3 249 - -
Lac13g0369 267 Coils Coil 196 216 - -
Lac13g0369 267 Pfam 14-3-3 protein 14 236 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0775 Lac-Chr12:8129676 Lac13g0369 Lac-Chr13:2618890 1.10E-106 dispersed
Lac13g0369 Lac-Chr13:2618890 Lac6g0798 Lac-Chr6:6836645 4.10E-110 dispersed
Lac13g0369 Lac-Chr13:2618890 Lac6g0892 Lac-Chr6:7867681 1.00E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0369 K06630 - csv:101221275 471.085