Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac13g0371 ATGGCTTCGATGACAAACGTAATTCAGTCTCCAATTCGTGCATATGGGTTACCTTCACTTCGATTGCCTCCGAATAGAACAGTTCCCGCCAATTCTGCCCTTCTCAAATGTCGATCACTTGCTTCTAAAGCTTTGAACTCGCCGTTGACGGAGAACCGAACCGTTTCGCCATCGGTGGAACTAACTAGCAAGGCTGTTTGGCTCTTGAGCTCTAGACAACCGTTCGAGTCTCGAAGTGTTGATCGGCGGCCGGTGGTCAGGGCGGCTGCAGCTGATGCCAACGAAGCATCCGATGGGTTGACAAGCTCTTCGAAGAGCTTTGCTGCAAGATTTCCAGCACTCATTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAACAAAAAAGTTTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTTGGTCTGCCAAAACGTGCTCCGATAGATAAGGAGCTCTTGCAATTATTGACTCCAGTTTCGCTATGCCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTCTCCTTCACTCACACCATTAAAGCTCTGGAACCATTCTTTAACGCTGCTGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCCGTTGTTTTAGGTGTGTCAATCGCATCACTAACGGAACTTTCCTTCAATTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTTACTTACAGAAGTATCTATTCGAAGAAGGCAATGACAGGAATGGACAGTACAAACGTGTATGCATACACCTCAATAATTGCTCTTTTGTTTTGCATTCCTCCAGCAGTAATGATTGAGGGACCGCAGTTGCTGCGGCATGGTTTCAAGGATGCCATTGCCAAAGTGGGTCTTCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGCATGTTTTATCATCTGTACAACCAGCTTGCCACTAATACCCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATCGTTGTTTTTGGCAACAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAGACTTGGAGGAGAAAAAACGGAGGGCTGCTAAAATTCCAGCATCATAG 1266 43.68 MASMTNVIQSPIRAYGLPSLRLPPNRTVPANSALLKCRSLASKALNSPLTENRTVSPSVELTSKAVWLLSSRQPFESRSVDRRPVVRAAAADANEASDGLTSSSKSFAARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRAPIDKELLQLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSIASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLRHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKADLEEKKRRAAKIPAS 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2633022 2636872 + Lag0040167.1 Lac13g0371 591527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac13g0371 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 296 403 - -
Lac13g0371 421 Pfam Triose-phosphate Transporter family 116 402 IPR004853 -
Lac13g0371 421 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 114 412 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lac13g0371 421 PANTHER SOLUTE CARRIER FAMILY 35 105 403 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0371 Lac-Chr13:2633022 Lac1g3358 Lac-Chr1:53222348 9.50E-154 dispersed
Lac13g0371 Lac-Chr13:2633022 Lac1g3227 Lac-Chr1:52232091 1.50E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac13g0371 K15283 - csv:101221040 689.878