Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac13g0372 | ATGGCGGCTTTCGTGTTCTTAGTGTTTTTCCTTGCCCTAACTGGTCGATCGTATGCGAACTATTGCTTGTGTAGAGATGGGGTTAGCCAACAAGTCCTTCAAAAGGCACTGGACTATGCCTGTGGAGCTGGAGGTGACTGTTCTGCGATCCTCTCCAGTGGCGCCTGTTTTCAGCCCAACACTGTCAAAGATCACTGCAATTACGCCGTCAACAGTTATTTCCAGAGAAAGGGACAAGTCCAAGGAAGCTGTGACTTCAACGGGGCCGCCACTCCCAGCGTTTCTCTCACCGCCTCTGTGCCCTCTGGTTGCGTCTATCCTTCTAGCCCAGCTGTCCATGATGTTGATCTTTTCTCATCACCTCCTTGTCGTCTTCTTCTCCAGATCTCCCGATTCCTTTTCCCACCTGTTGTCGAGATGTCCAATGCGGGAACCTCGCCGACGAACTCCGGAACCACGCCGACGACGATGACTCCAGGGACGCCGTCGACGACGAATCCGGGAATGACGCCGACGGTGTTCGGGAACGGAATCAGCCCGAGCGGGAGCGGCTCCAGTTTCAACGACGGCAGCGGCGGCGTGGGTTTCAATGAGAATAGGAACTTGCTTATAGCTGTGGGCCTAACTCTGTGGCTTTCCGTATTGTTGCTCTGGGGATGA | 660 | 54.39 | MAAFVFLVFFLALTGRSYANYCLCRDGVSQQVLQKALDYACGAGGDCSAILSSGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFNGAATPSVSLTASVPSGCVYPSSPAVHDVDLFSSPPCRLLLQISRFLFPPVVEMSNAGTSPTNSGTTPTTMTPGTPSTTNPGMTPTVFGNGISPSGSGSSFNDGSGGVGFNENRNLLIAVGLTLWLSVLLLWG | 219 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 2641911 | 2643167 | + | Lag0040168.1 | Lac13g0372 | 591528 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac13g0372 | 219 | MobiDBLite | consensus disorder prediction | 143 | 186 | - | - | |
| Lac13g0372 | 219 | Gene3D | - | 17 | 107 | - | - | |
| Lac13g0372 | 219 | Pfam | X8 domain | 21 | 91 | IPR012946 | - | |
| Lac13g0372 | 219 | PANTHER | BETA-1,3 GLUCANASE | 8 | 109 | IPR044788 | - | |
| Lac13g0372 | 219 | SMART | X8_cls | 20 | 106 | IPR012946 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac13g0372 | Lac-Chr13:2641911 | Lac9g1205 | Lac-Chr9:28174815 | 3.40E-14 | dispersed | |
| Lac10g0143 | Lac-Chr10:1088689 | Lac13g0372 | Lac-Chr13:2641911 | 3.60E-29 | wgd | |
| Lac13g0372 | Lac-Chr13:2641911 | Lac3g0566 | Lac-Chr3:4356745 | 1.00E-29 | wgd | |
| Lac13g0372 | Lac-Chr13:2641911 | Lac6g0796 | Lac-Chr6:6822402 | 3.40E-38 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac13g0372 | - | - | - | 0.0 |